Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4dQ8BGV9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4dQ8BGV9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Gm18473-201ENSMUST00000220543 868 ntBASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4dQ8BGV9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Atg4dQ8BGV9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Atg4dQ8BGV9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Gm42790-201ENSMUST00000201268 969 ntBASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Gm7653-201ENSMUST00000214567 508 ntBASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.58□□□□□ -0.4
Atg4dQ8BGV9 Itm2b-204ENSMUST00000228637 783 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms