Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Gm15957-201ENSMUST00000118893 974 ntBASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Gm5779-201ENSMUST00000218467 910 ntBASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Thap2-203ENSMUST00000218989 527 ntBASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Gm6007-201ENSMUST00000208170 823 ntBASIC14.14□□□□□ -0.15
Srrm3Q80WV7 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.14□□□□□ -0.15
Srrm3Q80WV7 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Gm17837-201ENSMUST00000186435 985 ntBASIC14.13□□□□□ -0.15
Srrm3Q80WV7 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.13□□□□□ -0.15
Srrm3Q80WV7 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srrm3Q80WV7 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srrm3Q80WV7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srrm3Q80WV7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms