Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Gm13612-201ENSMUST00000119276 390 ntBASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Gm6152-201ENSMUST00000151704 340 ntBASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Gm27847-201ENSMUST00000183711 107 ntBASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Gm27375-201ENSMUST00000183799 107 ntBASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.28□□□□□ -0.28
Pcdh19Q80TF3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh19Q80TF3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh19Q80TF3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh19Q80TF3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Pcdh19Q80TF3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Pcdh19Q80TF3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh19Q80TF3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh19Q80TF3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Pcdh19Q80TF3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh19Q80TF3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh19Q80TF3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh19Q80TF3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Gm43438-201ENSMUST00000198133 379 ntBASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh19Q80TF3 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Gm12390-201ENSMUST00000117897 397 ntBASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Gm11425-201ENSMUST00000119608 498 ntBASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Itm2b-204ENSMUST00000228637 783 ntBASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Gm9396-201ENSMUST00000076703 567 ntBASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh19Q80TF3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms