Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd1Q6PIP5 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd1Q6PIP5 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd1Q6PIP5 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd1Q6PIP5 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nudcd1Q6PIP5 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nudcd1Q6PIP5 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 AY702102-202ENSMUST00000194651 1173 ntBASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nudcd1Q6PIP5 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nudcd1Q6PIP5 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Gm5687-201ENSMUST00000118252 640 ntBASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Gm38144-201ENSMUST00000192790 465 ntBASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Gm7561-201ENSMUST00000211203 886 ntBASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.63□□□□□ -0.23
Nudcd1Q6PIP5 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms