Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Gm21769-201ENSMUST00000211922 111 ntBASIC14.08□□□□□ -0.16
Ccdc85bQ6PDY0 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc85bQ6PDY0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc85bQ6PDY0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc85bQ6PDY0 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc85bQ6PDY0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc85bQ6PDY0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc85bQ6PDY0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc85bQ6PDY0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc85bQ6PDY0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc85bQ6PDY0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc85bQ6PDY0 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc85bQ6PDY0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc85bQ6PDY0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc85bQ6PDY0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Gm8805-201ENSMUST00000117848 313 ntBASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Gm5687-201ENSMUST00000118252 640 ntBASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Gm4909-201ENSMUST00000118749 794 ntBASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Mospd4-201ENSMUST00000180618 576 ntBASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc85bQ6PDY0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc85bQ6PDY0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc85bQ6PDY0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms