Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm11439-201ENSMUST00000118598 409 ntBASIC17.33■□□□□ 0.37
Chd4Q6PDQ2 Rn7s1-201ENSMUST00000174924 300 ntBASIC17.33■□□□□ 0.37
Chd4Q6PDQ2 Rn7s2-201ENSMUST00000175032 300 ntBASIC17.33■□□□□ 0.37
Chd4Q6PDQ2 Gm26461-201ENSMUST00000175064 290 ntBASIC17.33■□□□□ 0.37
Chd4Q6PDQ2 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC17.33■□□□□ 0.37
Chd4Q6PDQ2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC17.33■□□□□ 0.37
Chd4Q6PDQ2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC17.33■□□□□ 0.37
Chd4Q6PDQ2 Gm37466-201ENSMUST00000195692 652 ntBASIC17.33■□□□□ 0.37
Chd4Q6PDQ2 Gm19963-201ENSMUST00000208413 1255 ntBASIC17.33■□□□□ 0.37
Chd4Q6PDQ2 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd4Q6PDQ2 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd4Q6PDQ2 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd4Q6PDQ2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC17.33■□□□□ 0.37
Chd4Q6PDQ2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd4Q6PDQ2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd4Q6PDQ2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Chd4Q6PDQ2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Chd4Q6PDQ2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Gm12997-201ENSMUST00000120207 640 ntBASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd4Q6PDQ2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 Gm38317-201ENSMUST00000195564 343 ntBASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 AC113441.2-201ENSMUST00000221538 1468 ntBASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd4Q6PDQ2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Gm8885-201ENSMUST00000189382 598 ntBASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC17.31■□□□□ 0.36
Chd4Q6PDQ2 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms