Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Grk6-205ENSMUST00000224653 2976 ntBASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Gm27486-201ENSMUST00000184923 80 ntBASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Gm2495-201ENSMUST00000191160 466 ntBASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 AY702102-202ENSMUST00000194651 1173 ntBASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Hmgb4Q6P8W9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Gm12928-201ENSMUST00000117115 573 ntBASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Gm13689-201ENSMUST00000119360 685 ntBASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Gm24420-201ENSMUST00000176676 59 ntBASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Gm43630-201ENSMUST00000201550 776 ntBASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmgb4Q6P8W9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.17□□□□□ -0.14
Hmgb4Q6P8W9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms