Protein–RNA interactions for Protein: Q6P4S6

Sik3, Serine/threonine-protein kinase SIK3, mousemouse

Predictions only

Length 1,311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sik3Q6P4S6 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sik3Q6P4S6 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Sik3Q6P4S6 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sik3Q6P4S6 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sik3Q6P4S6 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.08■□□□□ 0.16
Sik3Q6P4S6 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sik3Q6P4S6 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Gm4271-201ENSMUST00000174444 973 ntBASIC16.07■□□□□ 0.16
Sik3Q6P4S6 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.07■□□□□ 0.16
Sik3Q6P4S6 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Itm2b-204ENSMUST00000228637 783 ntBASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sik3Q6P4S6 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Gm22018-201ENSMUST00000104357 131 ntBASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Gm29608-201ENSMUST00000190444 463 ntBASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sik3Q6P4S6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Gm27516-201ENSMUST00000184237 98 ntBASIC16.05■□□□□ 0.16
Sik3Q6P4S6 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Gm45930-201ENSMUST00000221330 292 ntBASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sik3Q6P4S6 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sik3Q6P4S6 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms