Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scube3Q66PY1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Scube3Q66PY1 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scube3Q66PY1 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scube3Q66PY1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scube3Q66PY1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scube3Q66PY1 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scube3Q66PY1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scube3Q66PY1 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scube3Q66PY1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.27□□□□□ -0.12
Scube3Q66PY1 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scube3Q66PY1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scube3Q66PY1 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scube3Q66PY1 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Scube3Q66PY1 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scube3Q66PY1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scube3Q66PY1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scube3Q66PY1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Scube3Q66PY1 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scube3Q66PY1 Gm14201-201ENSMUST00000117627 289 ntBASIC14.27□□□□□ -0.13
Scube3Q66PY1 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scube3Q66PY1 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scube3Q66PY1 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.27□□□□□ -0.13
Scube3Q66PY1 Gm28911-201ENSMUST00000188837 117 ntBASIC14.27□□□□□ -0.13
Scube3Q66PY1 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scube3Q66PY1 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.27□□□□□ -0.13
Scube3Q66PY1 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.27□□□□□ -0.13
Scube3Q66PY1 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.27□□□□□ -0.13
Scube3Q66PY1 Gm17330-201ENSMUST00000221047 165 ntBASIC14.27□□□□□ -0.13
Scube3Q66PY1 AC132446.1-201ENSMUST00000222655 226 ntBASIC14.27□□□□□ -0.13
Scube3Q66PY1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scube3Q66PY1 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scube3Q66PY1 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Scube3Q66PY1 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scube3Q66PY1 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.27□□□□□ -0.13
Scube3Q66PY1 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scube3Q66PY1 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.27□□□□□ -0.13
Scube3Q66PY1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scube3Q66PY1 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.27□□□□□ -0.13
Scube3Q66PY1 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Scube3Q66PY1 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Scube3Q66PY1 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scube3Q66PY1 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scube3Q66PY1 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scube3Q66PY1 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scube3Q66PY1 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scube3Q66PY1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scube3Q66PY1 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Scube3Q66PY1 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Gm11918-201ENSMUST00000121660 179 ntBASIC14.26□□□□□ -0.13
Scube3Q66PY1 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.26□□□□□ -0.13
Scube3Q66PY1 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Gm16107-201ENSMUST00000162523 862 ntBASIC14.26□□□□□ -0.13
Scube3Q66PY1 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Gm27701-201ENSMUST00000184498 110 ntBASIC14.26□□□□□ -0.13
Scube3Q66PY1 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.26□□□□□ -0.13
Scube3Q66PY1 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.26□□□□□ -0.13
Scube3Q66PY1 CT010431.1-201ENSMUST00000221249 1080 ntBASIC14.26□□□□□ -0.13
Scube3Q66PY1 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scube3Q66PY1 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms