Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gli3Q61602 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gli3Q61602 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gli3Q61602 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gli3Q61602 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gli3Q61602 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gli3Q61602 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gli3Q61602 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gli3Q61602 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gli3Q61602 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gli3Q61602 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC17.76■□□□□ 0.43
Gli3Q61602 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gli3Q61602 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC17.76■□□□□ 0.43
Gli3Q61602 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC17.76■□□□□ 0.43
Gli3Q61602 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gli3Q61602 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gli3Q61602 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gli3Q61602 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Gli3Q61602 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gli3Q61602 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gli3Q61602 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gli3Q61602 Gm38355-201ENSMUST00000192514 1570 ntBASIC17.76■□□□□ 0.43
Gli3Q61602 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gli3Q61602 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gli3Q61602 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gli3Q61602 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gli3Q61602 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gli3Q61602 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Gli3Q61602 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gli3Q61602 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC17.75■□□□□ 0.43
Gli3Q61602 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gli3Q61602 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC17.75■□□□□ 0.43
Gli3Q61602 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gli3Q61602 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gli3Q61602 Mir6923-201ENSMUST00000184592 72 ntBASIC17.75■□□□□ 0.43
Gli3Q61602 Gm5525-201ENSMUST00000190438 1312 ntBASIC17.75■□□□□ 0.43
Gli3Q61602 Gm45120-201ENSMUST00000208880 408 ntBASIC17.75■□□□□ 0.43
Gli3Q61602 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC17.75■□□□□ 0.43
Gli3Q61602 Mt1-202ENSMUST00000211807 1085 ntBASIC17.75■□□□□ 0.43
Gli3Q61602 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gli3Q61602 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gli3Q61602 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gli3Q61602 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gli3Q61602 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gli3Q61602 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gli3Q61602 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gli3Q61602 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gli3Q61602 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Gli3Q61602 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Gli3Q61602 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gli3Q61602 Gm9387-201ENSMUST00000098624 1320 ntBASIC17.75■□□□□ 0.43
Gli3Q61602 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gli3Q61602 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gli3Q61602 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gli3Q61602 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gli3Q61602 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gli3Q61602 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC17.75■□□□□ 0.43
Gli3Q61602 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Gli3Q61602 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gli3Q61602 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC17.75■□□□□ 0.43
Gli3Q61602 Gm12948-201ENSMUST00000119406 682 ntBASIC17.74■□□□□ 0.43
Gli3Q61602 Gm12196-201ENSMUST00000120954 262 ntBASIC17.74■□□□□ 0.43
Gli3Q61602 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gli3Q61602 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC17.74■□□□□ 0.43
Gli3Q61602 Gm10731-201ENSMUST00000181171 448 ntBASIC17.74■□□□□ 0.43
Gli3Q61602 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gli3Q61602 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gli3Q61602 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gli3Q61602 Gm6722-201ENSMUST00000221586 390 ntBASIC17.74■□□□□ 0.43
Gli3Q61602 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gli3Q61602 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gli3Q61602 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC17.74■□□□□ 0.43
Gli3Q61602 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gli3Q61602 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gli3Q61602 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gli3Q61602 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Gli3Q61602 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gli3Q61602 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gli3Q61602 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Gli3Q61602 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gli3Q61602 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gli3Q61602 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.74■□□□□ 0.43
Gli3Q61602 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gli3Q61602 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gli3Q61602 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gli3Q61602 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC17.74■□□□□ 0.43
Gli3Q61602 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC17.74■□□□□ 0.43
Gli3Q61602 Gm23363-201ENSMUST00000175024 79 ntBASIC17.74■□□□□ 0.43
Gli3Q61602 Gm27530-201ENSMUST00000184096 98 ntBASIC17.74■□□□□ 0.43
Gli3Q61602 Gm43692-201ENSMUST00000198236 1062 ntBASIC17.74■□□□□ 0.43
Gli3Q61602 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gli3Q61602 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC17.74■□□□□ 0.43
Gli3Q61602 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC17.74■□□□□ 0.43
Gli3Q61602 AC171241.1-201ENSMUST00000228144 1166 ntBASIC17.74■□□□□ 0.43
Gli3Q61602 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gli3Q61602 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gli3Q61602 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gli3Q61602 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gli3Q61602 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gli3Q61602 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms