Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Zic4Q61467 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.95□□□□□ -0.66
Zic4Q61467 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Zic4Q61467 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Rubie-203ENSMUST00000227803 2430 ntBASIC10.95□□□□□ -0.66
Zic4Q61467 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Zic4Q61467 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Zic4Q61467 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.95□□□□□ -0.66
Zic4Q61467 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC10.95□□□□□ -0.66
Zic4Q61467 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.95□□□□□ -0.66
Zic4Q61467 Gm18737-201ENSMUST00000173594 937 ntBASIC10.95□□□□□ -0.66
Zic4Q61467 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC10.95□□□□□ -0.66
Zic4Q61467 Gm44492-201ENSMUST00000197012 141 ntBASIC10.95□□□□□ -0.66
Zic4Q61467 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC10.95□□□□□ -0.66
Zic4Q61467 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC10.95□□□□□ -0.66
Zic4Q61467 AC131997.1-201ENSMUST00000228611 1229 ntBASIC10.95□□□□□ -0.66
Zic4Q61467 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Zic4Q61467 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Zic4Q61467 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Zic4Q61467 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Matn2-203ENSMUST00000226766 3252 ntBASIC10.94□□□□□ -0.66
Zic4Q61467 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Zic4Q61467 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Zic4Q61467 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Gm6539-201ENSMUST00000119157 1064 ntBASIC10.94□□□□□ -0.66
Zic4Q61467 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC10.94□□□□□ -0.66
Zic4Q61467 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC10.94□□□□□ -0.66
Zic4Q61467 Gm5364-201ENSMUST00000216789 889 ntBASIC10.94□□□□□ -0.66
Zic4Q61467 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Zic4Q61467 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Zic4Q61467 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.94□□□□□ -0.66
Zic4Q61467 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Zic4Q61467 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Zic4Q61467 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Zic4Q61467 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Zic4Q61467 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Zic4Q61467 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Zic4Q61467 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Zic4Q61467 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Zic4Q61467 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.93□□□□□ -0.66
Zic4Q61467 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Zic4Q61467 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Zic4Q61467 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Zic4Q61467 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.93□□□□□ -0.66
Zic4Q61467 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Zic4Q61467 Mir874-201ENSMUST00000104769 76 ntBASIC10.93□□□□□ -0.66
Zic4Q61467 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC10.93□□□□□ -0.66
Zic4Q61467 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Zic4Q61467 Gm1401-201ENSMUST00000122048 772 ntBASIC10.93□□□□□ -0.66
Zic4Q61467 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.93□□□□□ -0.66
Zic4Q61467 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.93□□□□□ -0.66
Zic4Q61467 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC10.93□□□□□ -0.66
Zic4Q61467 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms