Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.21□□□□□ -0.29
Vsx2Q61412 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx2Q61412 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx2Q61412 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Vsx2Q61412 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.21□□□□□ -0.29
Vsx2Q61412 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx2Q61412 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.21□□□□□ -0.29
Vsx2Q61412 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx2Q61412 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx2Q61412 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.21□□□□□ -0.29
Vsx2Q61412 Gm12859-201ENSMUST00000117834 427 ntBASIC13.21□□□□□ -0.29
Vsx2Q61412 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Vsx2Q61412 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx2Q61412 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.21□□□□□ -0.29
Vsx2Q61412 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.21□□□□□ -0.29
Vsx2Q61412 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.21□□□□□ -0.29
Vsx2Q61412 Gm5425-201ENSMUST00000214125 459 ntBASIC13.21□□□□□ -0.29
Vsx2Q61412 Gm17795-201ENSMUST00000214505 757 ntBASIC13.21□□□□□ -0.29
Vsx2Q61412 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Vsx2Q61412 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx2Q61412 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx2Q61412 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx2Q61412 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx2Q61412 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx2Q61412 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx2Q61412 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.21□□□□□ -0.29
Vsx2Q61412 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vsx2Q61412 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vsx2Q61412 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vsx2Q61412 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.21□□□□□ -0.3
Vsx2Q61412 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vsx2Q61412 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Vsx2Q61412 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vsx2Q61412 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vsx2Q61412 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vsx2Q61412 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vsx2Q61412 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vsx2Q61412 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vsx2Q61412 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Vsx2Q61412 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Vsx2Q61412 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.2□□□□□ -0.3
Vsx2Q61412 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Vsx2Q61412 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.2□□□□□ -0.3
Vsx2Q61412 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Vsx2Q61412 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.2□□□□□ -0.3
Vsx2Q61412 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.2□□□□□ -0.3
Vsx2Q61412 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Vsx2Q61412 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.2□□□□□ -0.3
Vsx2Q61412 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Vsx2Q61412 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.2□□□□□ -0.3
Vsx2Q61412 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.2□□□□□ -0.3
Vsx2Q61412 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Vsx2Q61412 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.2□□□□□ -0.3
Vsx2Q61412 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.2□□□□□ -0.3
Vsx2Q61412 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.2□□□□□ -0.3
Vsx2Q61412 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.2□□□□□ -0.3
Vsx2Q61412 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.2□□□□□ -0.3
Vsx2Q61412 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.2□□□□□ -0.3
Vsx2Q61412 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Vsx2Q61412 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Vsx2Q61412 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Vsx2Q61412 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Vsx2Q61412 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vsx2Q61412 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms