Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.99□□□□□ -0.01
Ift88Q61371 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ift88Q61371 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.99□□□□□ -0.01
Ift88Q61371 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.99□□□□□ -0.01
Ift88Q61371 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.99□□□□□ -0.01
Ift88Q61371 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.99□□□□□ -0.01
Ift88Q61371 Gm15393-201ENSMUST00000120499 219 ntBASIC14.99□□□□□ -0.01
Ift88Q61371 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Ift88Q61371 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Ift88Q61371 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ift88Q61371 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.99□□□□□ -0.01
Ift88Q61371 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ift88Q61371 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.99□□□□□ -0.01
Ift88Q61371 Gm46209-201ENSMUST00000217912 553 ntBASIC14.99□□□□□ -0.01
Ift88Q61371 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.99□□□□□ -0.01
Ift88Q61371 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ift88Q61371 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.99□□□□□ -0.01
Ift88Q61371 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.99□□□□□ -0.01
Ift88Q61371 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ift88Q61371 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ift88Q61371 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ift88Q61371 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.98□□□□□ -0.01
Ift88Q61371 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ift88Q61371 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ift88Q61371 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ift88Q61371 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.98□□□□□ -0.01
Ift88Q61371 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ift88Q61371 Gm14822-201ENSMUST00000122247 291 ntBASIC14.98□□□□□ -0.01
Ift88Q61371 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.98□□□□□ -0.01
Ift88Q61371 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ift88Q61371 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.98□□□□□ -0.01
Ift88Q61371 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ift88Q61371 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ift88Q61371 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.98□□□□□ -0.01
Ift88Q61371 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.98□□□□□ -0.01
Ift88Q61371 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ift88Q61371 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ift88Q61371 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ift88Q61371 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ift88Q61371 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ift88Q61371 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ift88Q61371 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ift88Q61371 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ift88Q61371 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ift88Q61371 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ift88Q61371 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ift88Q61371 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ift88Q61371 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ift88Q61371 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ift88Q61371 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ift88Q61371 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ift88Q61371 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ift88Q61371 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ift88Q61371 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ift88Q61371 Mir449b-201ENSMUST00000104833 80 ntBASIC14.97□□□□□ -0.01
Ift88Q61371 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ift88Q61371 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ift88Q61371 Gm11594-201ENSMUST00000122313 162 ntBASIC14.97□□□□□ -0.01
Ift88Q61371 Gm24513-201ENSMUST00000174964 138 ntBASIC14.97□□□□□ -0.01
Ift88Q61371 Gm24420-201ENSMUST00000176676 59 ntBASIC14.97□□□□□ -0.01
Ift88Q61371 Gm27397-201ENSMUST00000184997 107 ntBASIC14.97□□□□□ -0.01
Ift88Q61371 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ift88Q61371 Gm10766-202ENSMUST00000194123 606 ntBASIC14.97□□□□□ -0.01
Ift88Q61371 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ift88Q61371 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ift88Q61371 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ift88Q61371 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ift88Q61371 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.97□□□□□ -0.01
Ift88Q61371 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ift88Q61371 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ift88Q61371 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ift88Q61371 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ift88Q61371 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ift88Q61371 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ift88Q61371 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms