Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col11a1Q61245 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Col11a1Q61245 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col11a1Q61245 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col11a1Q61245 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.82□□□□□ -0.04
Col11a1Q61245 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Col11a1Q61245 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.82□□□□□ -0.04
Col11a1Q61245 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.82□□□□□ -0.04
Col11a1Q61245 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col11a1Q61245 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.82□□□□□ -0.04
Col11a1Q61245 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col11a1Q61245 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col11a1Q61245 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.82□□□□□ -0.04
Col11a1Q61245 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.82□□□□□ -0.04
Col11a1Q61245 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Gm11628-201ENSMUST00000117568 171 ntBASIC14.82□□□□□ -0.04
Col11a1Q61245 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.82□□□□□ -0.04
Col11a1Q61245 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.82□□□□□ -0.04
Col11a1Q61245 Gm13996-201ENSMUST00000118456 430 ntBASIC14.82□□□□□ -0.04
Col11a1Q61245 Gm13045-201ENSMUST00000119019 712 ntBASIC14.82□□□□□ -0.04
Col11a1Q61245 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.82□□□□□ -0.04
Col11a1Q61245 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.82□□□□□ -0.04
Col11a1Q61245 Gm44651-201ENSMUST00000207343 372 ntBASIC14.82□□□□□ -0.04
Col11a1Q61245 AC125486.1-201ENSMUST00000218701 320 ntBASIC14.82□□□□□ -0.04
Col11a1Q61245 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.82□□□□□ -0.04
Col11a1Q61245 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.82□□□□□ -0.04
Col11a1Q61245 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.82□□□□□ -0.04
Col11a1Q61245 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.82□□□□□ -0.04
Col11a1Q61245 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.82□□□□□ -0.04
Col11a1Q61245 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col11a1Q61245 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col11a1Q61245 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col11a1Q61245 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col11a1Q61245 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.81□□□□□ -0.04
Col11a1Q61245 Gm13408-201ENSMUST00000119822 798 ntBASIC14.81□□□□□ -0.04
Col11a1Q61245 Gm13935-201ENSMUST00000121859 798 ntBASIC14.81□□□□□ -0.04
Col11a1Q61245 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.81□□□□□ -0.04
Col11a1Q61245 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.81□□□□□ -0.04
Col11a1Q61245 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
Col11a1Q61245 Gm39404-201ENSMUST00000216350 313 ntBASIC14.81□□□□□ -0.04
Col11a1Q61245 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col11a1Q61245 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.81□□□□□ -0.04
Col11a1Q61245 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col11a1Q61245 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col11a1Q61245 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.81□□□□□ -0.04
Col11a1Q61245 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col11a1Q61245 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.81□□□□□ -0.04
Col11a1Q61245 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col11a1Q61245 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col11a1Q61245 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col11a1Q61245 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col11a1Q61245 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col11a1Q61245 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Col11a1Q61245 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col11a1Q61245 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col11a1Q61245 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col11a1Q61245 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.81□□□□□ -0.04
Col11a1Q61245 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col11a1Q61245 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Col11a1Q61245 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col11a1Q61245 Gm12291-201ENSMUST00000121627 311 ntBASIC14.8□□□□□ -0.04
Col11a1Q61245 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.8□□□□□ -0.04
Col11a1Q61245 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.8□□□□□ -0.04
Col11a1Q61245 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.8□□□□□ -0.04
Col11a1Q61245 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.8□□□□□ -0.04
Col11a1Q61245 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.8□□□□□ -0.04
Col11a1Q61245 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.8□□□□□ -0.04
Col11a1Q61245 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col11a1Q61245 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col11a1Q61245 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.8□□□□□ -0.04
Col11a1Q61245 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col11a1Q61245 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col11a1Q61245 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col11a1Q61245 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col11a1Q61245 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms