Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Col12a1Q60847 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.05□□□□□ -0.32
Col12a1Q60847 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col12a1Q60847 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.04□□□□□ -0.32
Col12a1Q60847 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Col12a1Q60847 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 Gm37246-201ENSMUST00000192665 835 ntBASIC13.04□□□□□ -0.32
Col12a1Q60847 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Col12a1Q60847 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.04□□□□□ -0.32
Col12a1Q60847 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.04□□□□□ -0.32
Col12a1Q60847 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col12a1Q60847 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col12a1Q60847 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col12a1Q60847 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.04□□□□□ -0.32
Col12a1Q60847 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.04□□□□□ -0.32
Col12a1Q60847 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.04□□□□□ -0.32
Col12a1Q60847 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col12a1Q60847 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.04□□□□□ -0.32
Col12a1Q60847 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.04□□□□□ -0.32
Col12a1Q60847 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.04□□□□□ -0.32
Col12a1Q60847 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col12a1Q60847 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Gm13035-201ENSMUST00000117496 342 ntBASIC13.03□□□□□ -0.32
Col12a1Q60847 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.03□□□□□ -0.32
Col12a1Q60847 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.03□□□□□ -0.32
Col12a1Q60847 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.03□□□□□ -0.32
Col12a1Q60847 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Col12a1Q60847 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Col12a1Q60847 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.03□□□□□ -0.32
Col12a1Q60847 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col12a1Q60847 Gm12058-201ENSMUST00000118614 437 ntBASIC13.03□□□□□ -0.32
Col12a1Q60847 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.03□□□□□ -0.32
Col12a1Q60847 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.03□□□□□ -0.32
Col12a1Q60847 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.03□□□□□ -0.32
Col12a1Q60847 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.03□□□□□ -0.32
Col12a1Q60847 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.03□□□□□ -0.32
Col12a1Q60847 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.03□□□□□ -0.32
Col12a1Q60847 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col12a1Q60847 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col12a1Q60847 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col12a1Q60847 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.32
Col12a1Q60847 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col12a1Q60847 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col12a1Q60847 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col12a1Q60847 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col12a1Q60847 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col12a1Q60847 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms