Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NfkbibQ60778 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NfkbibQ60778 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NfkbibQ60778 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
NfkbibQ60778 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
NfkbibQ60778 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
NfkbibQ60778 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NfkbibQ60778 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
NfkbibQ60778 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NfkbibQ60778 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NfkbibQ60778 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.2■□□□□ 0.18
NfkbibQ60778 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NfkbibQ60778 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NfkbibQ60778 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NfkbibQ60778 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NfkbibQ60778 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NfkbibQ60778 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NfkbibQ60778 Gm11425-201ENSMUST00000119608 498 ntBASIC16.2■□□□□ 0.18
NfkbibQ60778 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NfkbibQ60778 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
NfkbibQ60778 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC16.2■□□□□ 0.18
NfkbibQ60778 Gm44069-201ENSMUST00000204898 506 ntBASIC16.2■□□□□ 0.18
NfkbibQ60778 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NfkbibQ60778 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.2■□□□□ 0.18
NfkbibQ60778 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NfkbibQ60778 Gm9396-201ENSMUST00000076703 567 ntBASIC16.2■□□□□ 0.18
NfkbibQ60778 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NfkbibQ60778 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NfkbibQ60778 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NfkbibQ60778 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NfkbibQ60778 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NfkbibQ60778 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.19■□□□□ 0.18
NfkbibQ60778 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NfkbibQ60778 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NfkbibQ60778 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NfkbibQ60778 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NfkbibQ60778 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NfkbibQ60778 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NfkbibQ60778 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
NfkbibQ60778 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NfkbibQ60778 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NfkbibQ60778 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NfkbibQ60778 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
NfkbibQ60778 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NfkbibQ60778 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NfkbibQ60778 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NfkbibQ60778 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
NfkbibQ60778 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NfkbibQ60778 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NfkbibQ60778 Gm12203-201ENSMUST00000118235 598 ntBASIC16.19■□□□□ 0.18
NfkbibQ60778 Gm12209-201ENSMUST00000120089 596 ntBASIC16.19■□□□□ 0.18
NfkbibQ60778 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC16.19■□□□□ 0.18
NfkbibQ60778 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NfkbibQ60778 Gm18062-201ENSMUST00000208020 547 ntBASIC16.19■□□□□ 0.18
NfkbibQ60778 Gm18055-201ENSMUST00000208254 547 ntBASIC16.19■□□□□ 0.18
NfkbibQ60778 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC16.19■□□□□ 0.18
NfkbibQ60778 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC16.19■□□□□ 0.18
NfkbibQ60778 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NfkbibQ60778 Gm16372-201ENSMUST00000073088 450 ntBASIC16.19■□□□□ 0.18
NfkbibQ60778 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NfkbibQ60778 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NfkbibQ60778 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
NfkbibQ60778 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC16.19■□□□□ 0.18
NfkbibQ60778 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC16.19■□□□□ 0.18
NfkbibQ60778 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NfkbibQ60778 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.18■□□□□ 0.18
NfkbibQ60778 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NfkbibQ60778 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Gm13226-201ENSMUST00000117838 404 ntBASIC16.18■□□□□ 0.18
NfkbibQ60778 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Mir1982-201ENSMUST00000157368 74 ntBASIC16.18■□□□□ 0.18
NfkbibQ60778 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NfkbibQ60778 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC16.18■□□□□ 0.18
NfkbibQ60778 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.18■□□□□ 0.18
NfkbibQ60778 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.18■□□□□ 0.18
NfkbibQ60778 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
NfkbibQ60778 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NfkbibQ60778 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms