Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Gm29649-201ENSMUST00000185649 419 ntBASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shroom1Q5SX79 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Gm38671-201ENSMUST00000200573 130 ntBASIC14.38□□□□□ -0.11
Shroom1Q5SX79 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shroom1Q5SX79 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Shroom1Q5SX79 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms