Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps54Q5SPW0 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Gm10040-201ENSMUST00000080726 1662 ntBASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.23■□□□□ 0.19
Vps54Q5SPW0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.22■□□□□ 0.19
Vps54Q5SPW0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Gm9755-201ENSMUST00000032981 1356 ntBASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps54Q5SPW0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vps54Q5SPW0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps54Q5SPW0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps54Q5SPW0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.21■□□□□ 0.19
Vps54Q5SPW0 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Vps54Q5SPW0 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps54Q5SPW0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps54Q5SPW0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps54Q5SPW0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps54Q5SPW0 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps54Q5SPW0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.21■□□□□ 0.19
Vps54Q5SPW0 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps54Q5SPW0 Mir1894-201ENSMUST00000122802 81 ntBASIC16.21■□□□□ 0.19
Vps54Q5SPW0 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.21■□□□□ 0.19
Vps54Q5SPW0 Gm27839-201ENSMUST00000184242 106 ntBASIC16.21■□□□□ 0.19
Vps54Q5SPW0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps54Q5SPW0 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps54Q5SPW0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps54Q5SPW0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps54Q5SPW0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps54Q5SPW0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps54Q5SPW0 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps54Q5SPW0 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps54Q5SPW0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
Vps54Q5SPW0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vps54Q5SPW0 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vps54Q5SPW0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vps54Q5SPW0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms