Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Syt7-205ENSMUST00000224135 1557 ntBASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Gm13730-201ENSMUST00000121036 1462 ntBASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-3Q5R1C3 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-3Q5R1C3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-3Q5R1C3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-3Q5R1C3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-3Q5R1C3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-3Q5R1C3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-3Q5R1C3 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.79
Trav3-3Q5R1C3 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Trav3-3Q5R1C3 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-3Q5R1C3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-3Q5R1C3 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Gm18856-201ENSMUST00000178096 1374 ntBASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Gm13418-201ENSMUST00000119097 944 ntBASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Gm43347-201ENSMUST00000200226 580 ntBASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-3Q5R1C3 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms