Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm5779-201ENSMUST00000218467 910 ntBASIC14.03□□□□□ -0.16
Trim80Q3V061 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim80Q3V061 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim80Q3V061 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim80Q3V061 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim80Q3V061 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim80Q3V061 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim80Q3V061 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.03□□□□□ -0.16
Trim80Q3V061 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim80Q3V061 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.03□□□□□ -0.16
Trim80Q3V061 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim80Q3V061 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim80Q3V061 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim80Q3V061 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim80Q3V061 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Trim80Q3V061 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim80Q3V061 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim80Q3V061 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim80Q3V061 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim80Q3V061 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim80Q3V061 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Trim80Q3V061 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim80Q3V061 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trim80Q3V061 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim80Q3V061 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim80Q3V061 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim80Q3V061 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Trim80Q3V061 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.02□□□□□ -0.16
Trim80Q3V061 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.02□□□□□ -0.16
Trim80Q3V061 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim80Q3V061 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim80Q3V061 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim80Q3V061 Gm2810-201ENSMUST00000118681 990 ntBASIC14.02□□□□□ -0.17
Trim80Q3V061 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.02□□□□□ -0.17
Trim80Q3V061 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim80Q3V061 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trim80Q3V061 Gm9824-201ENSMUST00000178707 561 ntBASIC14.02□□□□□ -0.17
Trim80Q3V061 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim80Q3V061 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim80Q3V061 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim80Q3V061 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim80Q3V061 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.02□□□□□ -0.17
Trim80Q3V061 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim80Q3V061 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim80Q3V061 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Trim80Q3V061 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim80Q3V061 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim80Q3V061 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim80Q3V061 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim80Q3V061 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim80Q3V061 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim80Q3V061 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim80Q3V061 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim80Q3V061 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trim80Q3V061 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim80Q3V061 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim80Q3V061 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim80Q3V061 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim80Q3V061 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.02□□□□□ -0.17
Trim80Q3V061 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trim80Q3V061 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trim80Q3V061 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim80Q3V061 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim80Q3V061 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Mir8102-201ENSMUST00000184148 139 ntBASIC14.01□□□□□ -0.17
Trim80Q3V061 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.01□□□□□ -0.17
Trim80Q3V061 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.01□□□□□ -0.17
Trim80Q3V061 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Trim80Q3V061 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim80Q3V061 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.01□□□□□ -0.17
Trim80Q3V061 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trim80Q3V061 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim80Q3V061 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms