Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Spg11Q3UHA3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Spg11Q3UHA3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Spg11Q3UHA3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Spg11Q3UHA3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Spg11Q3UHA3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Spg11Q3UHA3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Spg11Q3UHA3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.35□□□□□ -0.43
Spg11Q3UHA3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Spg11Q3UHA3 Gm16202-201ENSMUST00000117532 544 ntBASIC12.35□□□□□ -0.43
Spg11Q3UHA3 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Spg11Q3UHA3 Gm25072-201ENSMUST00000175233 235 ntBASIC12.35□□□□□ -0.43
Spg11Q3UHA3 Gm43778-201ENSMUST00000199438 199 ntBASIC12.35□□□□□ -0.43
Spg11Q3UHA3 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Spg11Q3UHA3 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Spg11Q3UHA3 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Spg11Q3UHA3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Spg11Q3UHA3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Gm8712-201ENSMUST00000221090 701 ntBASIC12.34□□□□□ -0.43
Spg11Q3UHA3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Spg11Q3UHA3 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Spg11Q3UHA3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Spg11Q3UHA3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Spg11Q3UHA3 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Spg11Q3UHA3 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.33□□□□□ -0.43
Spg11Q3UHA3 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Spg11Q3UHA3 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Spg11Q3UHA3 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Spg11Q3UHA3 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.33□□□□□ -0.43
Spg11Q3UHA3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Spg11Q3UHA3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Spg11Q3UHA3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Spg11Q3UHA3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Spg11Q3UHA3 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Spg11Q3UHA3 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Spg11Q3UHA3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Gm23949-201ENSMUST00000104027 127 ntBASIC12.33□□□□□ -0.44
Spg11Q3UHA3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Gm25043-201ENSMUST00000158604 212 ntBASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Gm22121-201ENSMUST00000175148 54 ntBASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Mt1-202ENSMUST00000211807 1085 ntBASIC12.33□□□□□ -0.44
Spg11Q3UHA3 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.33□□□□□ -0.44
Spg11Q3UHA3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Gm1821-202ENSMUST00000227415 750 ntBASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Mir483-201ENSMUST00000093631 73 ntBASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Spg11Q3UHA3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms