Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Cops9Q3U898 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC9.24□□□□□ -0.93
Cops9Q3U898 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Cops9Q3U898 Gm8258-201ENSMUST00000055593 1449 ntBASIC9.24□□□□□ -0.93
Cops9Q3U898 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC9.24□□□□□ -0.93
Cops9Q3U898 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Cops9Q3U898 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC9.24□□□□□ -0.93
Cops9Q3U898 Gm16026-204ENSMUST00000162652 683 ntBASIC9.24□□□□□ -0.93
Cops9Q3U898 Gm13830-205ENSMUST00000201195 1155 ntBASIC9.24□□□□□ -0.93
Cops9Q3U898 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Cops9Q3U898 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC9.24□□□□□ -0.93
Cops9Q3U898 CT030704.2-201ENSMUST00000228887 494 ntBASIC9.24□□□□□ -0.93
Cops9Q3U898 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Spr-ps1-201ENSMUST00000089584 605 ntBASIC9.24□□□□□ -0.93
Cops9Q3U898 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Gm5366-201ENSMUST00000215494 1338 ntBASIC9.24□□□□□ -0.93
Cops9Q3U898 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cops9Q3U898 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Cops9Q3U898 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC9.23□□□□□ -0.93
Cops9Q3U898 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC9.23□□□□□ -0.93
Cops9Q3U898 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cops9Q3U898 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Cops9Q3U898 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cops9Q3U898 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cops9Q3U898 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Cops9Q3U898 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cops9Q3U898 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cops9Q3U898 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC9.23□□□□□ -0.93
Cops9Q3U898 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC9.23□□□□□ -0.93
Cops9Q3U898 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC9.23□□□□□ -0.93
Cops9Q3U898 AC149294.4-201ENSMUST00000227870 882 ntBASIC9.23□□□□□ -0.93
Cops9Q3U898 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cops9Q3U898 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cops9Q3U898 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cops9Q3U898 Gm37500-201ENSMUST00000192059 1443 ntBASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms