Protein–RNA interactions for Protein: Q3U587

Gm10842, Predicted gene 10842 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10842Q3U587 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Gm10842Q3U587 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Gm25016-201ENSMUST00000158399 131 ntBASIC10.08□□□□□ -0.8
Gm10842Q3U587 AC153794.1-201ENSMUST00000169148 126 ntBASIC10.08□□□□□ -0.8
Gm10842Q3U587 Gm6623-201ENSMUST00000173570 544 ntBASIC10.08□□□□□ -0.8
Gm10842Q3U587 Gm18032-201ENSMUST00000222541 538 ntBASIC10.08□□□□□ -0.8
Gm10842Q3U587 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10842Q3U587 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Gm10842Q3U587 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.07□□□□□ -0.8
Gm10842Q3U587 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.07□□□□□ -0.8
Gm10842Q3U587 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.07□□□□□ -0.8
Gm10842Q3U587 Daam2-202ENSMUST00000224595 1926 ntBASIC10.07□□□□□ -0.8
Gm10842Q3U587 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.07□□□□□ -0.8
Gm10842Q3U587 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.07□□□□□ -0.8
Gm10842Q3U587 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.07□□□□□ -0.8
Gm10842Q3U587 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Gm5837-201ENSMUST00000191844 1369 ntBASIC10.07□□□□□ -0.8
Gm10842Q3U587 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Gm9013-201ENSMUST00000132939 882 ntBASIC10.07□□□□□ -0.8
Gm10842Q3U587 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Gm37230-201ENSMUST00000194491 818 ntBASIC10.07□□□□□ -0.8
Gm10842Q3U587 Gm44454-201ENSMUST00000198541 138 ntBASIC10.07□□□□□ -0.8
Gm10842Q3U587 Gm44487-201ENSMUST00000205145 325 ntBASIC10.07□□□□□ -0.8
Gm10842Q3U587 AC158538.1-201ENSMUST00000225870 294 ntBASIC10.07□□□□□ -0.8
Gm10842Q3U587 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10842Q3U587 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms