Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Q3U1D9 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.75□□□□□ -0.53
Q3U1D9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Q3U1D9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Gm12742-201ENSMUST00000117326 410 ntBASIC11.75□□□□□ -0.53
Q3U1D9 Gm13226-201ENSMUST00000117838 404 ntBASIC11.75□□□□□ -0.53
Q3U1D9 Gm5687-201ENSMUST00000118252 640 ntBASIC11.75□□□□□ -0.53
Q3U1D9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.75□□□□□ -0.53
Q3U1D9 Gm24644-201ENSMUST00000157114 139 ntBASIC11.75□□□□□ -0.53
Q3U1D9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.75□□□□□ -0.53
Q3U1D9 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.75□□□□□ -0.53
Q3U1D9 Gm45841-201ENSMUST00000207700 164 ntBASIC11.75□□□□□ -0.53
Q3U1D9 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Q3U1D9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.75□□□□□ -0.53
Q3U1D9 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.75□□□□□ -0.53
Q3U1D9 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Q3U1D9 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.75□□□□□ -0.53
Q3U1D9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Q3U1D9 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.75□□□□□ -0.53
Q3U1D9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Q3U1D9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3U1D9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.74□□□□□ -0.53
Q3U1D9 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Q3U1D9 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3U1D9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Q3U1D9 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Q3U1D9 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3U1D9 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.74□□□□□ -0.53
Q3U1D9 Gm8213-201ENSMUST00000118191 441 ntBASIC11.74□□□□□ -0.53
Q3U1D9 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3U1D9 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Q3U1D9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.74□□□□□ -0.53
Q3U1D9 Gm29608-201ENSMUST00000190444 463 ntBASIC11.74□□□□□ -0.53
Q3U1D9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.74□□□□□ -0.53
Q3U1D9 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.74□□□□□ -0.53
Q3U1D9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3U1D9 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Q3U1D9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3U1D9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3U1D9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Q3U1D9 Gm10012-201ENSMUST00000078252 192 ntBASIC11.74□□□□□ -0.53
Q3U1D9 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.74□□□□□ -0.53
Q3U1D9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3U1D9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.74□□□□□ -0.53
Q3U1D9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3U1D9 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Q3U1D9 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.74□□□□□ -0.53
Q3U1D9 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3U1D9 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.74□□□□□ -0.53
Q3U1D9 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Q3U1D9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3U1D9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3U1D9 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3U1D9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Q3U1D9 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Q3U1D9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.73□□□□□ -0.53
Q3U1D9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.73□□□□□ -0.53
Q3U1D9 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.73□□□□□ -0.53
Q3U1D9 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.73□□□□□ -0.53
Q3U1D9 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.73□□□□□ -0.53
Q3U1D9 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.73□□□□□ -0.53
Q3U1D9 Gm12403-201ENSMUST00000121384 959 ntBASIC11.73□□□□□ -0.53
Q3U1D9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Snora78-201ENSMUST00000158630 128 ntBASIC11.73□□□□□ -0.53
Q3U1D9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.73□□□□□ -0.53
Q3U1D9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Q3U1D9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Q3U1D9 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.73□□□□□ -0.53
Q3U1D9 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms