Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Gm27618-201ENSMUST00000183671 60 ntBASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cul4aQ3TCH7 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Gm44344-201ENSMUST00000200287 129 ntBASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cul4aQ3TCH7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cul4aQ3TCH7 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cul4aQ3TCH7 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cul4aQ3TCH7 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.21□□□□□ -0.14
Cul4aQ3TCH7 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cul4aQ3TCH7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cul4aQ3TCH7 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Cul4aQ3TCH7 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cul4aQ3TCH7 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms