Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Q3KNL4 Gm6736-201ENSMUST00000166583 948 ntBASIC13.31□□□□□ -0.28
Q3KNL4 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.31□□□□□ -0.28
Q3KNL4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Q3KNL4 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.31□□□□□ -0.28
Q3KNL4 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3KNL4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.31□□□□□ -0.28
Q3KNL4 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.31□□□□□ -0.28
Q3KNL4 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Q3KNL4 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.31□□□□□ -0.28
Q3KNL4 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Q3KNL4 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Q3KNL4 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3KNL4 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3KNL4 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3KNL4 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.31□□□□□ -0.28
Q3KNL4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.31□□□□□ -0.28
Q3KNL4 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.31□□□□□ -0.28
Q3KNL4 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Q3KNL4 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3KNL4 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Q3KNL4 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Q3KNL4 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Q3KNL4 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3KNL4 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3KNL4 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3KNL4 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Q3KNL4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Q3KNL4 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Q3KNL4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.3□□□□□ -0.28
Q3KNL4 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Q3KNL4 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.3□□□□□ -0.28
Q3KNL4 Gm27702-201ENSMUST00000184512 56 ntBASIC13.3□□□□□ -0.28
Q3KNL4 Gm27430-201ENSMUST00000184585 107 ntBASIC13.3□□□□□ -0.28
Q3KNL4 Gm44333-201ENSMUST00000197168 107 ntBASIC13.3□□□□□ -0.28
Q3KNL4 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.3□□□□□ -0.28
Q3KNL4 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Q3KNL4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.3□□□□□ -0.28
Q3KNL4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Q3KNL4 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Q3KNL4 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Q3KNL4 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3KNL4 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Q3KNL4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Q3KNL4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Q3KNL4 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Q3KNL4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.29□□□□□ -0.28
Q3KNL4 Gm15693-201ENSMUST00000120470 637 ntBASIC13.29□□□□□ -0.28
Q3KNL4 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Q3KNL4 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Q3KNL4 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.29□□□□□ -0.28
Q3KNL4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.29□□□□□ -0.28
Q3KNL4 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.29□□□□□ -0.28
Q3KNL4 Gm8927-201ENSMUST00000181978 981 ntBASIC13.29□□□□□ -0.28
Q3KNL4 Gm27533-201ENSMUST00000183800 152 ntBASIC13.29□□□□□ -0.28
Q3KNL4 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 132.7 ms