Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim63Q38HM4 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Gm12441-201ENSMUST00000121806 588 ntBASIC11.1□□□□□ -0.63
Trim63Q38HM4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC11.1□□□□□ -0.63
Trim63Q38HM4 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.1□□□□□ -0.63
Trim63Q38HM4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.1□□□□□ -0.63
Trim63Q38HM4 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.1□□□□□ -0.63
Trim63Q38HM4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.1□□□□□ -0.63
Trim63Q38HM4 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim63Q38HM4 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Mir1199-201ENSMUST00000117015 119 ntBASIC11.09□□□□□ -0.63
Trim63Q38HM4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.09□□□□□ -0.63
Trim63Q38HM4 AC135637.1-201ENSMUST00000227750 365 ntBASIC11.09□□□□□ -0.63
Trim63Q38HM4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim63Q38HM4 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.08□□□□□ -0.64
Trim63Q38HM4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.08□□□□□ -0.64
Trim63Q38HM4 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Trim63Q38HM4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms