Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm7192-201ENSMUST00000210793 1137 ntBASIC6.96□□□□□ -1.3
Ush2AQ2QI47 Gm9785-201ENSMUST00000062642 1006 ntBASIC6.96□□□□□ -1.3
Ush2AQ2QI47 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gm14451-201ENSMUST00000121581 1542 ntBASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gm24891-201ENSMUST00000104391 136 ntBASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gm45606-201ENSMUST00000209836 2795 ntBASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gm5525-201ENSMUST00000190438 1312 ntBASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gm7627-201ENSMUST00000183205 999 ntBASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 AC154759.1-201ENSMUST00000224137 1159 ntBASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gm8337-201ENSMUST00000187358 1938 ntBASIC6.95□□□□□ -1.3
Ush2AQ2QI47 AC164107.1-201ENSMUST00000227730 2161 ntBASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Ssr1-204ENSMUST00000225319 1610 ntBASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 AC096628.2-201ENSMUST00000225443 1413 ntBASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gm12196-201ENSMUST00000120954 262 ntBASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gm8199-201ENSMUST00000121323 823 ntBASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 AC173210.1-201ENSMUST00000222341 1131 ntBASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gm43205-201ENSMUST00000198622 1968 ntBASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gm6903-201ENSMUST00000160509 1366 ntBASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gm22763-201ENSMUST00000158374 107 ntBASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 AC129308.3-201ENSMUST00000225652 524 ntBASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC6.95□□□□□ -1.3
Ush2AQ2QI47 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ush2AQ2QI47 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Gm12620-201ENSMUST00000119791 1986 ntBASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Gm12612-201ENSMUST00000140182 1986 ntBASIC6.94□□□□□ -1.3
Ush2AQ2QI47 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Gm38007-201ENSMUST00000192187 313 ntBASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Ighv1-2-201ENSMUST00000195325 378 ntBASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms