Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.63□□□□□ -0.07
Col9a2Q07643 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Col9a2Q07643 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Col9a2Q07643 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.62□□□□□ -0.07
Col9a2Q07643 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Col9a2Q07643 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Gm8805-201ENSMUST00000117848 313 ntBASIC14.62□□□□□ -0.07
Col9a2Q07643 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.62□□□□□ -0.07
Col9a2Q07643 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.62□□□□□ -0.07
Col9a2Q07643 Gm27572-201ENSMUST00000183702 255 ntBASIC14.62□□□□□ -0.07
Col9a2Q07643 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.62□□□□□ -0.07
Col9a2Q07643 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.62□□□□□ -0.07
Col9a2Q07643 Gm43818-201ENSMUST00000200605 466 ntBASIC14.62□□□□□ -0.07
Col9a2Q07643 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Col9a2Q07643 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Col9a2Q07643 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Col9a2Q07643 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.62□□□□□ -0.07
Col9a2Q07643 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.62□□□□□ -0.07
Col9a2Q07643 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col9a2Q07643 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Col9a2Q07643 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Col9a2Q07643 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Col9a2Q07643 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.61□□□□□ -0.07
Col9a2Q07643 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.61□□□□□ -0.07
Col9a2Q07643 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 Gm37497-201ENSMUST00000195830 798 ntBASIC14.61□□□□□ -0.07
Col9a2Q07643 Gm18054-201ENSMUST00000207539 555 ntBASIC14.61□□□□□ -0.07
Col9a2Q07643 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.61□□□□□ -0.07
Col9a2Q07643 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.61□□□□□ -0.07
Col9a2Q07643 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.61□□□□□ -0.07
Col9a2Q07643 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.61□□□□□ -0.07
Col9a2Q07643 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Col9a2Q07643 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.61□□□□□ -0.07
Col9a2Q07643 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col9a2Q07643 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.6□□□□□ -0.07
Col9a2Q07643 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.6□□□□□ -0.07
Col9a2Q07643 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col9a2Q07643 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.6□□□□□ -0.07
Col9a2Q07643 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col9a2Q07643 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Col9a2Q07643 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col9a2Q07643 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col9a2Q07643 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col9a2Q07643 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col9a2Q07643 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col9a2Q07643 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col9a2Q07643 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms