Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Smarcc1P97496 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.87■□□□□ 0.29
Smarcc1P97496 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Smarcc1P97496 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.87■□□□□ 0.29
Smarcc1P97496 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Smarcc1P97496 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Smarcc1P97496 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.87■□□□□ 0.29
Smarcc1P97496 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcc1P97496 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.86■□□□□ 0.29
Smarcc1P97496 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Smarcc1P97496 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Smarcc1P97496 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcc1P97496 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Smarcc1P97496 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcc1P97496 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC16.86■□□□□ 0.29
Smarcc1P97496 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcc1P97496 Gm19163-201ENSMUST00000223313 780 ntBASIC16.86■□□□□ 0.29
Smarcc1P97496 AC122371.3-201ENSMUST00000223402 1061 ntBASIC16.86■□□□□ 0.29
Smarcc1P97496 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcc1P97496 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC16.86■□□□□ 0.29
Smarcc1P97496 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcc1P97496 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.86■□□□□ 0.29
Smarcc1P97496 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcc1P97496 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcc1P97496 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcc1P97496 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcc1P97496 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcc1P97496 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcc1P97496 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcc1P97496 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcc1P97496 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcc1P97496 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcc1P97496 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Smarcc1P97496 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcc1P97496 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcc1P97496 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcc1P97496 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Smarcc1P97496 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcc1P97496 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcc1P97496 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Smarcc1P97496 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC16.85■□□□□ 0.29
Smarcc1P97496 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC16.85■□□□□ 0.29
Smarcc1P97496 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC16.85■□□□□ 0.29
Smarcc1P97496 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcc1P97496 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC16.85■□□□□ 0.29
Smarcc1P97496 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcc1P97496 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Smarcc1P97496 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.85■□□□□ 0.29
Smarcc1P97496 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Smarcc1P97496 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcc1P97496 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC16.85■□□□□ 0.29
Smarcc1P97496 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcc1P97496 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.85■□□□□ 0.29
Smarcc1P97496 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcc1P97496 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
Smarcc1P97496 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcc1P97496 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.84■□□□□ 0.29
Smarcc1P97496 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Smarcc1P97496 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.84■□□□□ 0.29
Smarcc1P97496 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Gm6447-201ENSMUST00000118905 835 ntBASIC16.84■□□□□ 0.29
Smarcc1P97496 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC16.84■□□□□ 0.29
Smarcc1P97496 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.84■□□□□ 0.29
Smarcc1P97496 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC16.84■□□□□ 0.29
Smarcc1P97496 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC16.84■□□□□ 0.29
Smarcc1P97496 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC16.84■□□□□ 0.29
Smarcc1P97496 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Smarcc1P97496 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC16.84■□□□□ 0.29
Smarcc1P97496 CT030182.1-201ENSMUST00000225935 533 ntBASIC16.84■□□□□ 0.29
Smarcc1P97496 Morn2-202ENSMUST00000227729 656 ntBASIC16.84■□□□□ 0.29
Smarcc1P97496 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Smarcc1P97496 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
Smarcc1P97496 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms