Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm26083-201ENSMUST00000157904 193 ntBASIC16.88■□□□□ 0.29
Nkx2-3P97334 Gm4768-201ENSMUST00000206199 686 ntBASIC16.88■□□□□ 0.29
Nkx2-3P97334 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Nkx2-3P97334 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-3P97334 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-3P97334 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-3P97334 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Nkx2-3P97334 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-3P97334 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-3P97334 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-3P97334 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Nkx2-3P97334 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-3P97334 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-3P97334 CT009713.10-201ENSMUST00000225013 1986 ntBASIC16.88■□□□□ 0.29
Nkx2-3P97334 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Nkx2-3P97334 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-3P97334 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.87■□□□□ 0.29
Nkx2-3P97334 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-3P97334 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-3P97334 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-3P97334 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-3P97334 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-3P97334 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-3P97334 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-3P97334 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Nkx2-3P97334 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC16.87■□□□□ 0.29
Nkx2-3P97334 AC093022.1-201ENSMUST00000226949 1072 ntBASIC16.87■□□□□ 0.29
Nkx2-3P97334 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC16.87■□□□□ 0.29
Nkx2-3P97334 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-3P97334 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-3P97334 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-3P97334 Gm38157-201ENSMUST00000194178 1698 ntBASIC16.87■□□□□ 0.29
Nkx2-3P97334 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-3P97334 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Nkx2-3P97334 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-3P97334 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Nkx2-3P97334 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-3P97334 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Nkx2-3P97334 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-3P97334 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-3P97334 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-3P97334 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-3P97334 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-3P97334 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-3P97334 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-3P97334 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-3P97334 Gm4986-201ENSMUST00000119731 549 ntBASIC16.86■□□□□ 0.29
Nkx2-3P97334 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-3P97334 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC16.86■□□□□ 0.29
Nkx2-3P97334 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC16.86■□□□□ 0.29
Nkx2-3P97334 AC166051.1-201ENSMUST00000214313 210 ntBASIC16.86■□□□□ 0.29
Nkx2-3P97334 AC122371.3-201ENSMUST00000223402 1061 ntBASIC16.86■□□□□ 0.29
Nkx2-3P97334 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC16.86■□□□□ 0.29
Nkx2-3P97334 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-3P97334 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Nkx2-3P97334 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-3P97334 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-3P97334 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-3P97334 Gm38049-201ENSMUST00000195698 1372 ntBASIC16.86■□□□□ 0.29
Nkx2-3P97334 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-3P97334 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.86■□□□□ 0.29
Nkx2-3P97334 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Nkx2-3P97334 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-3P97334 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.86■□□□□ 0.29
Nkx2-3P97334 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-3P97334 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Nkx2-3P97334 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Nkx2-3P97334 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-3P97334 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Nkx2-3P97334 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.85■□□□□ 0.29
Nkx2-3P97334 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC16.85■□□□□ 0.29
Nkx2-3P97334 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-3P97334 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-3P97334 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-3P97334 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-3P97334 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-3P97334 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC16.85■□□□□ 0.29
Nkx2-3P97334 Gm24548-201ENSMUST00000158650 108 ntBASIC16.85■□□□□ 0.29
Nkx2-3P97334 Gm8738-201ENSMUST00000172606 329 ntBASIC16.85■□□□□ 0.29
Nkx2-3P97334 Mir3102-201ENSMUST00000175555 104 ntBASIC16.85■□□□□ 0.29
Nkx2-3P97334 Mospd4-201ENSMUST00000180618 576 ntBASIC16.85■□□□□ 0.29
Nkx2-3P97334 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC16.85■□□□□ 0.29
Nkx2-3P97334 AC073947.1-201ENSMUST00000216991 649 ntBASIC16.85■□□□□ 0.29
Nkx2-3P97334 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-3P97334 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
Nkx2-3P97334 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
Nkx2-3P97334 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-3P97334 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nkx2-3P97334 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Nkx2-3P97334 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
Nkx2-3P97334 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-3P97334 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-3P97334 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Nkx2-3P97334 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC16.85■□□□□ 0.29
Nkx2-3P97334 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-3P97334 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-3P97334 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-3P97334 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-3P97334 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-3P97334 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms