Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Gm15590-201ENSMUST00000078419 552 ntBASIC11.35□□□□□ -0.59
SgcaP82350 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
SgcaP82350 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.35□□□□□ -0.59
SgcaP82350 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.35□□□□□ -0.59
SgcaP82350 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.35□□□□□ -0.59
SgcaP82350 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
SgcaP82350 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
SgcaP82350 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.35□□□□□ -0.59
SgcaP82350 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
SgcaP82350 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.34□□□□□ -0.59
SgcaP82350 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.34□□□□□ -0.59
SgcaP82350 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.34□□□□□ -0.59
SgcaP82350 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.34□□□□□ -0.59
SgcaP82350 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.34□□□□□ -0.59
SgcaP82350 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.34□□□□□ -0.59
SgcaP82350 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.34□□□□□ -0.59
SgcaP82350 Gm27920-201ENSMUST00000183953 96 ntBASIC11.34□□□□□ -0.59
SgcaP82350 Gm28659-201ENSMUST00000188013 759 ntBASIC11.34□□□□□ -0.59
SgcaP82350 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.34□□□□□ -0.59
SgcaP82350 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SgcaP82350 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
SgcaP82350 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.34□□□□□ -0.59
SgcaP82350 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcaP82350 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SgcaP82350 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcaP82350 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
SgcaP82350 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcaP82350 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SgcaP82350 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcaP82350 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcaP82350 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SgcaP82350 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.33□□□□□ -0.6
SgcaP82350 Gm9385-201ENSMUST00000117563 472 ntBASIC11.33□□□□□ -0.6
SgcaP82350 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SgcaP82350 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.33□□□□□ -0.6
SgcaP82350 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.33□□□□□ -0.6
SgcaP82350 Gm5864-201ENSMUST00000202263 970 ntBASIC11.33□□□□□ -0.6
SgcaP82350 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcaP82350 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.33□□□□□ -0.6
SgcaP82350 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SgcaP82350 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcaP82350 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SgcaP82350 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SgcaP82350 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcaP82350 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SgcaP82350 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.33□□□□□ -0.6
SgcaP82350 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcaP82350 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
SgcaP82350 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.33□□□□□ -0.6
SgcaP82350 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcaP82350 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcaP82350 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcaP82350 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.33□□□□□ -0.6
SgcaP82350 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcaP82350 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcaP82350 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms