Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.97□□□□□ -0.17
Smad1P70340 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smad1P70340 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Smad1P70340 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smad1P70340 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.97□□□□□ -0.17
Smad1P70340 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smad1P70340 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smad1P70340 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Smad1P70340 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Smad1P70340 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smad1P70340 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smad1P70340 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Smad1P70340 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smad1P70340 Gm12138-201ENSMUST00000122180 951 ntBASIC13.97□□□□□ -0.17
Smad1P70340 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.97□□□□□ -0.17
Smad1P70340 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.97□□□□□ -0.17
Smad1P70340 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smad1P70340 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smad1P70340 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smad1P70340 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.97□□□□□ -0.17
Smad1P70340 Gm18062-201ENSMUST00000208020 547 ntBASIC13.97□□□□□ -0.17
Smad1P70340 Gm18055-201ENSMUST00000208254 547 ntBASIC13.97□□□□□ -0.17
Smad1P70340 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smad1P70340 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smad1P70340 Gm20445-201ENSMUST00000061905 565 ntBASIC13.97□□□□□ -0.17
Smad1P70340 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smad1P70340 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smad1P70340 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smad1P70340 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.97□□□□□ -0.17
Smad1P70340 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.97□□□□□ -0.17
Smad1P70340 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.97□□□□□ -0.17
Smad1P70340 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Smad1P70340 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smad1P70340 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Smad1P70340 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smad1P70340 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smad1P70340 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smad1P70340 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smad1P70340 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Smad1P70340 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smad1P70340 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smad1P70340 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smad1P70340 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smad1P70340 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smad1P70340 Gm22189-201ENSMUST00000103822 86 ntBASIC13.96□□□□□ -0.17
Smad1P70340 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smad1P70340 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smad1P70340 Gm4875-201ENSMUST00000118257 786 ntBASIC13.96□□□□□ -0.17
Smad1P70340 Gm15653-201ENSMUST00000119247 907 ntBASIC13.96□□□□□ -0.17
Smad1P70340 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.96□□□□□ -0.17
Smad1P70340 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.96□□□□□ -0.17
Smad1P70340 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smad1P70340 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Smad1P70340 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.96□□□□□ -0.17
Smad1P70340 AA619741-201ENSMUST00000195095 646 ntBASIC13.96□□□□□ -0.17
Smad1P70340 Gm44719-201ENSMUST00000206404 149 ntBASIC13.96□□□□□ -0.17
Smad1P70340 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Smad1P70340 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smad1P70340 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smad1P70340 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smad1P70340 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smad1P70340 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Smad1P70340 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smad1P70340 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smad1P70340 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smad1P70340 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smad1P70340 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smad1P70340 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Smad1P70340 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smad1P70340 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smad1P70340 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.95□□□□□ -0.18
Smad1P70340 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Smad1P70340 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Smad1P70340 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Smad1P70340 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.95□□□□□ -0.18
Smad1P70340 Mir7085-201ENSMUST00000184353 66 ntBASIC13.95□□□□□ -0.18
Smad1P70340 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.95□□□□□ -0.18
Smad1P70340 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Smad1P70340 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 Gm37714-201ENSMUST00000194742 342 ntBASIC13.95□□□□□ -0.18
Smad1P70340 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.95□□□□□ -0.18
Smad1P70340 Gm45668-201ENSMUST00000211271 493 ntBASIC13.95□□□□□ -0.18
Smad1P70340 Gm9908-201ENSMUST00000211534 448 ntBASIC13.95□□□□□ -0.18
Smad1P70340 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.95□□□□□ -0.18
Smad1P70340 Gm18027-201ENSMUST00000218947 619 ntBASIC13.95□□□□□ -0.18
Smad1P70340 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smad1P70340 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms