Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Crnkl1P63154 Gm27494-201ENSMUST00000184735 189 ntBASIC13.4□□□□□ -0.26
Crnkl1P63154 Gm43575-201ENSMUST00000196420 516 ntBASIC13.4□□□□□ -0.26
Crnkl1P63154 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Crnkl1P63154 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.4□□□□□ -0.26
Crnkl1P63154 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.4□□□□□ -0.26
Crnkl1P63154 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Crnkl1P63154 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Crnkl1P63154 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Crnkl1P63154 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Crnkl1P63154 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Crnkl1P63154 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Crnkl1P63154 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.4□□□□□ -0.26
Crnkl1P63154 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.4□□□□□ -0.26
Crnkl1P63154 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Crnkl1P63154 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Crnkl1P63154 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Crnkl1P63154 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Crnkl1P63154 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Crnkl1P63154 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Crnkl1P63154 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Crnkl1P63154 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.39□□□□□ -0.27
Crnkl1P63154 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.39□□□□□ -0.27
Crnkl1P63154 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Crnkl1P63154 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Crnkl1P63154 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.39□□□□□ -0.27
Crnkl1P63154 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Crnkl1P63154 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Crnkl1P63154 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.39□□□□□ -0.27
Crnkl1P63154 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Gm16026-204ENSMUST00000162652 683 ntBASIC13.39□□□□□ -0.27
Crnkl1P63154 Gm37230-201ENSMUST00000194491 818 ntBASIC13.39□□□□□ -0.27
Crnkl1P63154 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.39□□□□□ -0.27
Crnkl1P63154 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Crnkl1P63154 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Crnkl1P63154 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.39□□□□□ -0.27
Crnkl1P63154 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.39□□□□□ -0.27
Crnkl1P63154 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.39□□□□□ -0.27
Crnkl1P63154 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.39□□□□□ -0.27
Crnkl1P63154 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.39□□□□□ -0.27
Crnkl1P63154 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Crnkl1P63154 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crnkl1P63154 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Crnkl1P63154 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crnkl1P63154 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Crnkl1P63154 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crnkl1P63154 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Crnkl1P63154 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Crnkl1P63154 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Crnkl1P63154 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crnkl1P63154 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.38□□□□□ -0.27
Crnkl1P63154 Rpph1-201ENSMUST00000175096 319 ntBASIC13.38□□□□□ -0.27
Crnkl1P63154 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.38□□□□□ -0.27
Crnkl1P63154 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Crnkl1P63154 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.38□□□□□ -0.27
Crnkl1P63154 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Crnkl1P63154 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.38□□□□□ -0.27
Crnkl1P63154 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.38□□□□□ -0.27
Crnkl1P63154 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crnkl1P63154 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crnkl1P63154 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Crnkl1P63154 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crnkl1P63154 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crnkl1P63154 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.38□□□□□ -0.27
Crnkl1P63154 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crnkl1P63154 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.38□□□□□ -0.27
Crnkl1P63154 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crnkl1P63154 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Crnkl1P63154 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Crnkl1P63154 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms