Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Rpl39P62892 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC9.63□□□□□ -0.87
Rpl39P62892 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC9.63□□□□□ -0.87
Rpl39P62892 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC9.63□□□□□ -0.87
Rpl39P62892 Gm13823-201ENSMUST00000119930 345 ntBASIC9.63□□□□□ -0.87
Rpl39P62892 Gm12350-201ENSMUST00000121208 462 ntBASIC9.63□□□□□ -0.87
Rpl39P62892 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC9.63□□□□□ -0.87
Rpl39P62892 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC9.63□□□□□ -0.87
Rpl39P62892 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC9.63□□□□□ -0.87
Rpl39P62892 Gm21362-201ENSMUST00000194272 928 ntBASIC9.63□□□□□ -0.87
Rpl39P62892 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC9.63□□□□□ -0.87
Rpl39P62892 AC154222.1-201ENSMUST00000223882 475 ntBASIC9.63□□□□□ -0.87
Rpl39P62892 AC154572.2-201ENSMUST00000225105 997 ntBASIC9.63□□□□□ -0.87
Rpl39P62892 AC149294.4-201ENSMUST00000227870 882 ntBASIC9.63□□□□□ -0.87
Rpl39P62892 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Rpl39P62892 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC9.63□□□□□ -0.87
Rpl39P62892 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Rpl39P62892 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Rpl39P62892 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC9.63□□□□□ -0.87
Rpl39P62892 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 AC122314.1-201ENSMUST00000223056 2239 ntBASIC9.63□□□□□ -0.87
Rpl39P62892 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Rpl39P62892 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC9.63□□□□□ -0.87
Rpl39P62892 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Rpl39P62892 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Rpl39P62892 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Rpl39P62892 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 BC001981-202ENSMUST00000191393 1545 ntBASIC9.62□□□□□ -0.87
Rpl39P62892 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Rpl39P62892 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Rpl39P62892 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Rpl39P62892 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC9.62□□□□□ -0.87
Rpl39P62892 Gm28659-201ENSMUST00000188013 759 ntBASIC9.62□□□□□ -0.87
Rpl39P62892 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 AC090659.1-201ENSMUST00000224334 768 ntBASIC9.62□□□□□ -0.87
Rpl39P62892 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC9.62□□□□□ -0.87
Rpl39P62892 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Rpl39P62892 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC9.62□□□□□ -0.87
Rpl39P62892 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Rpl39P62892 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Rpl39P62892 Gm42748-201ENSMUST00000199354 2341 ntBASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms