Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Lsm6P62313 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Gm12151-201ENSMUST00000121374 290 ntBASIC11.89□□□□□ -0.51
Lsm6P62313 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Lsm6P62313 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
Lsm6P62313 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.89□□□□□ -0.51
Lsm6P62313 Gm17330-201ENSMUST00000221047 165 ntBASIC11.89□□□□□ -0.51
Lsm6P62313 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.89□□□□□ -0.51
Lsm6P62313 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.89□□□□□ -0.51
Lsm6P62313 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Lsm6P62313 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Lsm6P62313 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.89□□□□□ -0.51
Lsm6P62313 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.89□□□□□ -0.51
Lsm6P62313 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Lsm6P62313 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.88□□□□□ -0.51
Lsm6P62313 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Lsm6P62313 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.88□□□□□ -0.51
Lsm6P62313 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.88□□□□□ -0.51
Lsm6P62313 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.88□□□□□ -0.51
Lsm6P62313 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.88□□□□□ -0.51
Lsm6P62313 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.88□□□□□ -0.51
Lsm6P62313 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Gm9797-201ENSMUST00000052902 613 ntBASIC11.88□□□□□ -0.51
Lsm6P62313 Gm24447-201ENSMUST00000083977 338 ntBASIC11.88□□□□□ -0.51
Lsm6P62313 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Lsm6P62313 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.88□□□□□ -0.51
Lsm6P62313 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm6P62313 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.87□□□□□ -0.51
Lsm6P62313 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.87□□□□□ -0.51
Lsm6P62313 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Lsm6P62313 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.87□□□□□ -0.51
Lsm6P62313 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.87□□□□□ -0.51
Lsm6P62313 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.87□□□□□ -0.51
Lsm6P62313 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.87□□□□□ -0.51
Lsm6P62313 Gm5279-201ENSMUST00000199575 745 ntBASIC11.87□□□□□ -0.51
Lsm6P62313 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.87□□□□□ -0.51
Lsm6P62313 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.87□□□□□ -0.51
Lsm6P62313 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms