Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Lsm3P62311 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Lsm3P62311 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Lsm3P62311 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Lsm3P62311 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.3□□□□□ -0.44
Lsm3P62311 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm3P62311 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm3P62311 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Lsm3P62311 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.3□□□□□ -0.44
Lsm3P62311 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm3P62311 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm3P62311 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm3P62311 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.3□□□□□ -0.44
Lsm3P62311 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm3P62311 Gm25990-201ENSMUST00000102440 86 ntBASIC12.3□□□□□ -0.44
Lsm3P62311 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.3□□□□□ -0.44
Lsm3P62311 Gm11764-201ENSMUST00000120221 623 ntBASIC12.3□□□□□ -0.44
Lsm3P62311 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm3P62311 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Lsm3P62311 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.3□□□□□ -0.44
Lsm3P62311 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Lsm3P62311 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.3□□□□□ -0.44
Lsm3P62311 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm3P62311 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm3P62311 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm3P62311 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm3P62311 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm3P62311 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm3P62311 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lsm3P62311 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Lsm3P62311 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Lsm3P62311 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.3□□□□□ -0.44
Lsm3P62311 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Lsm3P62311 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.3□□□□□ -0.44
Lsm3P62311 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm3P62311 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm3P62311 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.3□□□□□ -0.44
Lsm3P62311 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm3P62311 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm3P62311 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm3P62311 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm3P62311 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Lsm3P62311 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm3P62311 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm3P62311 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm3P62311 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm3P62311 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.29□□□□□ -0.44
Lsm3P62311 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm3P62311 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm3P62311 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm3P62311 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.29□□□□□ -0.44
Lsm3P62311 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm3P62311 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Lsm3P62311 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm3P62311 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm3P62311 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm3P62311 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.29□□□□□ -0.44
Lsm3P62311 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm3P62311 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.29□□□□□ -0.44
Lsm3P62311 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.29□□□□□ -0.44
Lsm3P62311 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm3P62311 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm3P62311 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.29□□□□□ -0.44
Lsm3P62311 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lsm3P62311 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm3P62311 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm3P62311 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm3P62311 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm3P62311 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Lsm3P62311 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.29□□□□□ -0.44
Lsm3P62311 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Lsm3P62311 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.29□□□□□ -0.44
Lsm3P62311 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm3P62311 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm3P62311 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm3P62311 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm3P62311 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm3P62311 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm3P62311 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm3P62311 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm3P62311 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.28□□□□□ -0.44
Lsm3P62311 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm3P62311 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.28□□□□□ -0.44
Lsm3P62311 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm3P62311 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm3P62311 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm3P62311 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm3P62311 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms