Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sssca1P56873 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sssca1P56873 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.93□□□□□ -0.66
Sssca1P56873 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Sssca1P56873 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sssca1P56873 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sssca1P56873 Gm13015-201ENSMUST00000118674 204 ntBASIC10.93□□□□□ -0.66
Sssca1P56873 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC10.93□□□□□ -0.66
Sssca1P56873 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sssca1P56873 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.93□□□□□ -0.66
Sssca1P56873 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC10.93□□□□□ -0.66
Sssca1P56873 Ighv1-51-201ENSMUST00000192903 354 ntBASIC10.93□□□□□ -0.66
Sssca1P56873 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC10.93□□□□□ -0.66
Sssca1P56873 AC131710.1-201ENSMUST00000228336 990 ntBASIC10.93□□□□□ -0.66
Sssca1P56873 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sssca1P56873 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sssca1P56873 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sssca1P56873 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Gm7899-201ENSMUST00000192935 1897 ntBASIC10.93□□□□□ -0.66
Sssca1P56873 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sssca1P56873 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sssca1P56873 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sssca1P56873 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Sssca1P56873 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sssca1P56873 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sssca1P56873 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC10.92□□□□□ -0.66
Sssca1P56873 Gm5566-201ENSMUST00000116118 459 ntBASIC10.92□□□□□ -0.66
Sssca1P56873 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Sssca1P56873 Gm9719-201ENSMUST00000162765 543 ntBASIC10.92□□□□□ -0.66
Sssca1P56873 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sssca1P56873 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC10.92□□□□□ -0.66
Sssca1P56873 AC121804.3-201ENSMUST00000223420 295 ntBASIC10.92□□□□□ -0.66
Sssca1P56873 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Sssca1P56873 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sssca1P56873 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Mir497b-201ENSMUST00000093601 125 ntBASIC10.92□□□□□ -0.66
Sssca1P56873 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sssca1P56873 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sssca1P56873 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sssca1P56873 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Sssca1P56873 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Sssca1P56873 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sssca1P56873 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sssca1P56873 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms