Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.14□□□□□ -0.15
NcanP55066 Gm8584-201ENSMUST00000171982 758 ntBASIC14.14□□□□□ -0.15
NcanP55066 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NcanP55066 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.14□□□□□ -0.15
NcanP55066 Gm7902-201ENSMUST00000198842 947 ntBASIC14.14□□□□□ -0.15
NcanP55066 Gm8285-201ENSMUST00000208293 759 ntBASIC14.14□□□□□ -0.15
NcanP55066 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NcanP55066 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.14□□□□□ -0.15
NcanP55066 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.14□□□□□ -0.15
NcanP55066 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NcanP55066 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NcanP55066 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
NcanP55066 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.13□□□□□ -0.15
NcanP55066 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.13□□□□□ -0.15
NcanP55066 Gm45224-201ENSMUST00000208203 414 ntBASIC14.13□□□□□ -0.15
NcanP55066 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.13□□□□□ -0.15
NcanP55066 Gm3318-201ENSMUST00000217604 1183 ntBASIC14.13□□□□□ -0.15
NcanP55066 AC125486.1-201ENSMUST00000218701 320 ntBASIC14.13□□□□□ -0.15
NcanP55066 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Gm8894-201ENSMUST00000074642 666 ntBASIC14.13□□□□□ -0.15
NcanP55066 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.13□□□□□ -0.15
NcanP55066 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.13□□□□□ -0.15
NcanP55066 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NcanP55066 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.12□□□□□ -0.15
NcanP55066 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NcanP55066 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NcanP55066 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NcanP55066 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
NcanP55066 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NcanP55066 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NcanP55066 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NcanP55066 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NcanP55066 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NcanP55066 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NcanP55066 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.12□□□□□ -0.15
NcanP55066 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NcanP55066 Gm44405-201ENSMUST00000198952 126 ntBASIC14.12□□□□□ -0.15
NcanP55066 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NcanP55066 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NcanP55066 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NcanP55066 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
NcanP55066 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NcanP55066 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NcanP55066 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NcanP55066 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NcanP55066 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NcanP55066 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.12□□□□□ -0.15
NcanP55066 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NcanP55066 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NcanP55066 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NcanP55066 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NcanP55066 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NcanP55066 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NcanP55066 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms