Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx6P54823 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Ddx6P54823 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Ddx6P54823 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx6P54823 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx6P54823 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ddx6P54823 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx6P54823 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Ddx6P54823 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx6P54823 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx6P54823 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx6P54823 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx6P54823 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.71□□□□□ -0.21
Ddx6P54823 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx6P54823 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx6P54823 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx6P54823 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx6P54823 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx6P54823 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx6P54823 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx6P54823 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx6P54823 Gm6447-201ENSMUST00000118905 835 ntBASIC13.71□□□□□ -0.21
Ddx6P54823 Gm13123-201ENSMUST00000122173 492 ntBASIC13.71□□□□□ -0.21
Ddx6P54823 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.71□□□□□ -0.21
Ddx6P54823 Gm38002-201ENSMUST00000193255 180 ntBASIC13.71□□□□□ -0.21
Ddx6P54823 Gm37008-201ENSMUST00000195712 319 ntBASIC13.71□□□□□ -0.21
Ddx6P54823 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.71□□□□□ -0.21
Ddx6P54823 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.71□□□□□ -0.21
Ddx6P54823 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.71□□□□□ -0.21
Ddx6P54823 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.71□□□□□ -0.21
Ddx6P54823 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx6P54823 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ddx6P54823 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx6P54823 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx6P54823 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx6P54823 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx6P54823 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ddx6P54823 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ddx6P54823 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ddx6P54823 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
Ddx6P54823 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Ddx6P54823 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ddx6P54823 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ddx6P54823 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ddx6P54823 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
Ddx6P54823 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.7□□□□□ -0.22
Ddx6P54823 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.7□□□□□ -0.22
Ddx6P54823 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.7□□□□□ -0.22
Ddx6P54823 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.7□□□□□ -0.22
Ddx6P54823 Gm42627-201ENSMUST00000197347 224 ntBASIC13.7□□□□□ -0.22
Ddx6P54823 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.7□□□□□ -0.22
Ddx6P54823 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.7□□□□□ -0.22
Ddx6P54823 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.7□□□□□ -0.22
Ddx6P54823 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx6P54823 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ddx6P54823 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ddx6P54823 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ddx6P54823 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ddx6P54823 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx6P54823 Gm11637-201ENSMUST00000120601 592 ntBASIC13.69□□□□□ -0.22
Ddx6P54823 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.69□□□□□ -0.22
Ddx6P54823 Gm16379-201ENSMUST00000161469 348 ntBASIC13.69□□□□□ -0.22
Ddx6P54823 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.69□□□□□ -0.22
Ddx6P54823 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.69□□□□□ -0.22
Ddx6P54823 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms