Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt1P50431 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt1P50431 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Shmt1P50431 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt1P50431 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.3□□□□□ -0.12
Shmt1P50431 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt1P50431 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt1P50431 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt1P50431 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt1P50431 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt1P50431 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt1P50431 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Shmt1P50431 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt1P50431 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Shmt1P50431 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt1P50431 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Shmt1P50431 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.3□□□□□ -0.12
Shmt1P50431 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.3□□□□□ -0.12
Shmt1P50431 Gm7287-201ENSMUST00000205267 602 ntBASIC14.3□□□□□ -0.12
Shmt1P50431 Gm18062-201ENSMUST00000208020 547 ntBASIC14.3□□□□□ -0.12
Shmt1P50431 Gm18055-201ENSMUST00000208254 547 ntBASIC14.3□□□□□ -0.12
Shmt1P50431 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.3□□□□□ -0.12
Shmt1P50431 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt1P50431 Gm5356-201ENSMUST00000093326 615 ntBASIC14.3□□□□□ -0.12
Shmt1P50431 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt1P50431 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt1P50431 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt1P50431 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt1P50431 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt1P50431 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt1P50431 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt1P50431 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt1P50431 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.3□□□□□ -0.12
Shmt1P50431 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.29□□□□□ -0.12
Shmt1P50431 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Shmt1P50431 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.29□□□□□ -0.12
Shmt1P50431 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Gm38144-201ENSMUST00000192790 465 ntBASIC14.29□□□□□ -0.12
Shmt1P50431 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.29□□□□□ -0.12
Shmt1P50431 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Shmt1P50431 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Shmt1P50431 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.29□□□□□ -0.12
Shmt1P50431 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.29□□□□□ -0.12
Shmt1P50431 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Shmt1P50431 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Shmt1P50431 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Shmt1P50431 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.29□□□□□ -0.12
Shmt1P50431 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Shmt1P50431 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt1P50431 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.29□□□□□ -0.12
Shmt1P50431 Matn2-206ENSMUST00000228570 2798 ntBASIC14.28□□□□□ -0.12
Shmt1P50431 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt1P50431 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt1P50431 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt1P50431 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt1P50431 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Shmt1P50431 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Shmt1P50431 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt1P50431 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt1P50431 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt1P50431 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.28□□□□□ -0.12
Shmt1P50431 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt1P50431 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Shmt1P50431 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt1P50431 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.28□□□□□ -0.12
Shmt1P50431 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt1P50431 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt1P50431 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Shmt1P50431 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt1P50431 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.28□□□□□ -0.12
Shmt1P50431 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt1P50431 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.28□□□□□ -0.12
Shmt1P50431 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Shmt1P50431 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.28□□□□□ -0.12
Shmt1P50431 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt1P50431 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms