Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
TgfaP48030 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TgfaP48030 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
TgfaP48030 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
TgfaP48030 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TgfaP48030 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TgfaP48030 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TgfaP48030 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TgfaP48030 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.72□□□□□ -0.53
TgfaP48030 Gm13297-201ENSMUST00000120205 934 ntBASIC11.72□□□□□ -0.53
TgfaP48030 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.72□□□□□ -0.53
TgfaP48030 Gm2231-201ENSMUST00000125661 612 ntBASIC11.72□□□□□ -0.53
TgfaP48030 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.72□□□□□ -0.53
TgfaP48030 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TgfaP48030 Gm8584-201ENSMUST00000171982 758 ntBASIC11.72□□□□□ -0.53
TgfaP48030 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TgfaP48030 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TgfaP48030 Gm6621-201ENSMUST00000193251 772 ntBASIC11.72□□□□□ -0.53
TgfaP48030 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.72□□□□□ -0.53
TgfaP48030 Gm3786-201ENSMUST00000202659 378 ntBASIC11.72□□□□□ -0.53
TgfaP48030 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.72□□□□□ -0.53
TgfaP48030 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.72□□□□□ -0.53
TgfaP48030 Gm8227-201ENSMUST00000223306 571 ntBASIC11.72□□□□□ -0.53
TgfaP48030 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TgfaP48030 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
TgfaP48030 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
TgfaP48030 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
TgfaP48030 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TgfaP48030 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TgfaP48030 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TgfaP48030 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.72□□□□□ -0.53
TgfaP48030 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.72□□□□□ -0.53
TgfaP48030 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TgfaP48030 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
TgfaP48030 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TgfaP48030 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TgfaP48030 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TgfaP48030 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TgfaP48030 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TgfaP48030 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TgfaP48030 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
TgfaP48030 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TgfaP48030 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.71□□□□□ -0.53
TgfaP48030 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TgfaP48030 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TgfaP48030 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TgfaP48030 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TgfaP48030 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TgfaP48030 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.71□□□□□ -0.53
TgfaP48030 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.71□□□□□ -0.53
TgfaP48030 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
TgfaP48030 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TgfaP48030 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TgfaP48030 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TgfaP48030 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TgfaP48030 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TgfaP48030 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.71□□□□□ -0.53
TgfaP48030 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TgfaP48030 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
TgfaP48030 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
TgfaP48030 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TgfaP48030 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.71□□□□□ -0.53
TgfaP48030 Gm4986-201ENSMUST00000119731 549 ntBASIC11.71□□□□□ -0.53
TgfaP48030 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
TgfaP48030 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
TgfaP48030 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
TgfaP48030 Gm17376-201ENSMUST00000166016 84 ntBASIC11.71□□□□□ -0.53
TgfaP48030 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.71□□□□□ -0.53
TgfaP48030 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TgfaP48030 Gm2383-201ENSMUST00000181461 807 ntBASIC11.71□□□□□ -0.53
TgfaP48030 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.71□□□□□ -0.53
TgfaP48030 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TgfaP48030 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TgfaP48030 Gm5363-201ENSMUST00000211927 938 ntBASIC11.71□□□□□ -0.53
TgfaP48030 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TgfaP48030 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
TgfaP48030 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.71□□□□□ -0.53
TgfaP48030 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
TgfaP48030 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TgfaP48030 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
TgfaP48030 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TgfaP48030 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TgfaP48030 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TgfaP48030 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.71□□□□□ -0.54
TgfaP48030 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
TgfaP48030 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
TgfaP48030 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TgfaP48030 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TgfaP48030 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TgfaP48030 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TgfaP48030 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
TgfaP48030 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.7□□□□□ -0.54
TgfaP48030 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TgfaP48030 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TgfaP48030 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TgfaP48030 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TgfaP48030 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
TgfaP48030 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TgfaP48030 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.7□□□□□ -0.54
TgfaP48030 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms