Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-6P43688 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.8□□□□□ -0.36
Nkx2-6P43688 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-6P43688 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.8□□□□□ -0.36
Nkx2-6P43688 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-6P43688 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-6P43688 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-6P43688 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-6P43688 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nkx2-6P43688 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-6P43688 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nkx2-6P43688 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-6P43688 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-6P43688 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nkx2-6P43688 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.8□□□□□ -0.36
Nkx2-6P43688 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.8□□□□□ -0.36
Nkx2-6P43688 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.79□□□□□ -0.36
Nkx2-6P43688 Gm8598-201ENSMUST00000221184 836 ntBASIC12.79□□□□□ -0.36
Nkx2-6P43688 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Gm10478-201ENSMUST00000084451 396 ntBASIC12.79□□□□□ -0.36
Nkx2-6P43688 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Nkx2-6P43688 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-6P43688 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.78□□□□□ -0.36
Nkx2-6P43688 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-6P43688 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.78□□□□□ -0.36
Nkx2-6P43688 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Gm43818-201ENSMUST00000200605 466 ntBASIC12.78□□□□□ -0.36
Nkx2-6P43688 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-6P43688 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx2-6P43688 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Nkx2-6P43688 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx2-6P43688 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx2-6P43688 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx2-6P43688 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx2-6P43688 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Nkx2-6P43688 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx2-6P43688 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-6P43688 Gm11803-201ENSMUST00000119966 444 ntBASIC12.77□□□□□ -0.37
Nkx2-6P43688 Gm8062-201ENSMUST00000139696 444 ntBASIC12.77□□□□□ -0.37
Nkx2-6P43688 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx2-6P43688 Gm17420-201ENSMUST00000164753 153 ntBASIC12.77□□□□□ -0.37
Nkx2-6P43688 Proscos-202ENSMUST00000178990 666 ntBASIC12.77□□□□□ -0.37
Nkx2-6P43688 Gm27514-201ENSMUST00000183692 110 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms