Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox18P43680 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox18P43680 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sox18P43680 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.02□□□□□ -0.32
Sox18P43680 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox18P43680 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.02□□□□□ -0.32
Sox18P43680 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox18P43680 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox18P43680 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox18P43680 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.02□□□□□ -0.32
Sox18P43680 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.02□□□□□ -0.32
Sox18P43680 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox18P43680 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Sox18P43680 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox18P43680 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox18P43680 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Sox18P43680 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox18P43680 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox18P43680 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.02□□□□□ -0.33
Sox18P43680 Gm20482-202ENSMUST00000174729 825 ntBASIC13.02□□□□□ -0.33
Sox18P43680 Gm16505-201ENSMUST00000179981 232 ntBASIC13.02□□□□□ -0.33
Sox18P43680 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox18P43680 Gm38170-201ENSMUST00000195404 816 ntBASIC13.02□□□□□ -0.33
Sox18P43680 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.02□□□□□ -0.33
Sox18P43680 Gm45610-201ENSMUST00000209227 784 ntBASIC13.02□□□□□ -0.33
Sox18P43680 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox18P43680 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox18P43680 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox18P43680 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox18P43680 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Sox18P43680 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Sox18P43680 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox18P43680 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox18P43680 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox18P43680 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.02□□□□□ -0.33
Sox18P43680 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox18P43680 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox18P43680 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox18P43680 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox18P43680 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox18P43680 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox18P43680 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox18P43680 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sox18P43680 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.01□□□□□ -0.33
Sox18P43680 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sox18P43680 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sox18P43680 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Gm13461-201ENSMUST00000120980 662 ntBASIC13.01□□□□□ -0.33
Sox18P43680 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.01□□□□□ -0.33
Sox18P43680 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC13.01□□□□□ -0.33
Sox18P43680 Gm25927-201ENSMUST00000175058 117 ntBASIC13.01□□□□□ -0.33
Sox18P43680 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.01□□□□□ -0.33
Sox18P43680 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.01□□□□□ -0.33
Sox18P43680 Gm42550-201ENSMUST00000201553 960 ntBASIC13.01□□□□□ -0.33
Sox18P43680 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox18P43680 Gm45166-201ENSMUST00000209073 683 ntBASIC13.01□□□□□ -0.33
Sox18P43680 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox18P43680 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.01□□□□□ -0.33
Sox18P43680 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sox18P43680 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Sox18P43680 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sox18P43680 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.01□□□□□ -0.33
Sox18P43680 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sox18P43680 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox18P43680 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox18P43680 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13□□□□□ -0.33
Sox18P43680 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13□□□□□ -0.33
Sox18P43680 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms