Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Tnfsf4P43488 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Tnfsf4P43488 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.08□□□□□ -0.32
Tnfsf4P43488 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.08□□□□□ -0.32
Tnfsf4P43488 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Tnfsf4P43488 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.08□□□□□ -0.32
Tnfsf4P43488 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.08□□□□□ -0.32
Tnfsf4P43488 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfsf4P43488 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.08□□□□□ -0.32
Tnfsf4P43488 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.07□□□□□ -0.32
Tnfsf4P43488 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Gm10766-202ENSMUST00000194123 606 ntBASIC13.07□□□□□ -0.32
Tnfsf4P43488 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf4P43488 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf4P43488 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf4P43488 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf4P43488 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf4P43488 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.06□□□□□ -0.32
Tnfsf4P43488 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.06□□□□□ -0.32
Tnfsf4P43488 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Tnfsf4P43488 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf4P43488 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf4P43488 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf4P43488 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf4P43488 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf4P43488 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf4P43488 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf4P43488 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf4P43488 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Tnfsf4P43488 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.06□□□□□ -0.32
Tnfsf4P43488 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf4P43488 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.06□□□□□ -0.32
Tnfsf4P43488 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf4P43488 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms