Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hist1h1dP43277 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hist1h1dP43277 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hist1h1dP43277 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.46□□□□□ -0.57
Hist1h1dP43277 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hist1h1dP43277 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hist1h1dP43277 Gm15460-201ENSMUST00000118147 391 ntBASIC11.46□□□□□ -0.57
Hist1h1dP43277 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hist1h1dP43277 Gm12428-201ENSMUST00000119844 727 ntBASIC11.46□□□□□ -0.57
Hist1h1dP43277 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hist1h1dP43277 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hist1h1dP43277 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.46□□□□□ -0.57
Hist1h1dP43277 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.46□□□□□ -0.57
Hist1h1dP43277 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.46□□□□□ -0.57
Hist1h1dP43277 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.46□□□□□ -0.57
Hist1h1dP43277 Mir6990-201ENSMUST00000183724 91 ntBASIC11.46□□□□□ -0.57
Hist1h1dP43277 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hist1h1dP43277 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.46□□□□□ -0.57
Hist1h1dP43277 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hist1h1dP43277 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hist1h1dP43277 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hist1h1dP43277 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hist1h1dP43277 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hist1h1dP43277 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
Hist1h1dP43277 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hist1h1dP43277 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hist1h1dP43277 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hist1h1dP43277 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.46□□□□□ -0.58
Hist1h1dP43277 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hist1h1dP43277 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hist1h1dP43277 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hist1h1dP43277 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Hist1h1dP43277 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hist1h1dP43277 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Hist1h1dP43277 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hist1h1dP43277 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hist1h1dP43277 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hist1h1dP43277 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hist1h1dP43277 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.45□□□□□ -0.58
Hist1h1dP43277 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.45□□□□□ -0.58
Hist1h1dP43277 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Gm24543-201ENSMUST00000103867 82 ntBASIC11.45□□□□□ -0.58
Hist1h1dP43277 Mir874-201ENSMUST00000104769 76 ntBASIC11.45□□□□□ -0.58
Hist1h1dP43277 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hist1h1dP43277 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hist1h1dP43277 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.45□□□□□ -0.58
Hist1h1dP43277 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.45□□□□□ -0.58
Hist1h1dP43277 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.45□□□□□ -0.58
Hist1h1dP43277 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hist1h1dP43277 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hist1h1dP43277 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.44□□□□□ -0.58
Hist1h1dP43277 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hist1h1dP43277 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hist1h1dP43277 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hist1h1dP43277 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hist1h1dP43277 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hist1h1dP43277 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hist1h1dP43277 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hist1h1dP43277 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hist1h1dP43277 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hist1h1dP43277 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hist1h1dP43277 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hist1h1dP43277 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
Hist1h1dP43277 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hist1h1dP43277 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hist1h1dP43277 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hist1h1dP43277 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Hist1h1dP43277 Gm15678-201ENSMUST00000117573 960 ntBASIC11.44□□□□□ -0.58
Hist1h1dP43277 Gm13385-201ENSMUST00000121089 220 ntBASIC11.44□□□□□ -0.58
Hist1h1dP43277 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.44□□□□□ -0.58
Hist1h1dP43277 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Hist1h1dP43277 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms