Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdx2P43241 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdx2P43241 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdx2P43241 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.81□□□□□ -0.36
Cdx2P43241 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.81□□□□□ -0.36
Cdx2P43241 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdx2P43241 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cdx2P43241 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Cdx2P43241 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.81□□□□□ -0.36
Cdx2P43241 Gm7809-201ENSMUST00000153199 742 ntBASIC12.81□□□□□ -0.36
Cdx2P43241 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.81□□□□□ -0.36
Cdx2P43241 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.81□□□□□ -0.36
Cdx2P43241 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.81□□□□□ -0.36
Cdx2P43241 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdx2P43241 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.81□□□□□ -0.36
Cdx2P43241 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.81□□□□□ -0.36
Cdx2P43241 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.81□□□□□ -0.36
Cdx2P43241 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdx2P43241 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Cdx2P43241 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cdx2P43241 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.8□□□□□ -0.36
Cdx2P43241 Gm6447-201ENSMUST00000118905 835 ntBASIC12.8□□□□□ -0.36
Cdx2P43241 Gm4986-201ENSMUST00000119731 549 ntBASIC12.8□□□□□ -0.36
Cdx2P43241 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.8□□□□□ -0.36
Cdx2P43241 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.8□□□□□ -0.36
Cdx2P43241 Gm17376-201ENSMUST00000166016 84 ntBASIC12.8□□□□□ -0.36
Cdx2P43241 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 Gm7046-201ENSMUST00000221351 977 ntBASIC12.8□□□□□ -0.36
Cdx2P43241 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 Mir433-201ENSMUST00000093564 124 ntBASIC12.8□□□□□ -0.36
Cdx2P43241 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Cdx2P43241 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cdx2P43241 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.8□□□□□ -0.36
Cdx2P43241 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cdx2P43241 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdx2P43241 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdx2P43241 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cdx2P43241 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx2P43241 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx2P43241 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx2P43241 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx2P43241 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdx2P43241 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx2P43241 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx2P43241 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx2P43241 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx2P43241 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.79□□□□□ -0.36
Cdx2P43241 Gm16479-201ENSMUST00000121706 932 ntBASIC12.79□□□□□ -0.36
Cdx2P43241 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.79□□□□□ -0.36
Cdx2P43241 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdx2P43241 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.79□□□□□ -0.36
Cdx2P43241 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Cdx2P43241 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cdx2P43241 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx2P43241 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cdx2P43241 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdx2P43241 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms