Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HttP42859 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.03□□□□□ -0.16
HttP42859 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HttP42859 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HttP42859 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC14.03□□□□□ -0.16
HttP42859 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HttP42859 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.03□□□□□ -0.16
HttP42859 Gm14058-201ENSMUST00000116082 735 ntBASIC14.03□□□□□ -0.16
HttP42859 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC14.03□□□□□ -0.16
HttP42859 Gm42779-201ENSMUST00000198807 406 ntBASIC14.03□□□□□ -0.16
HttP42859 Gm3318-201ENSMUST00000217604 1183 ntBASIC14.03□□□□□ -0.16
HttP42859 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
HttP42859 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HttP42859 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.03□□□□□ -0.16
HttP42859 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HttP42859 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
HttP42859 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.03□□□□□ -0.16
HttP42859 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.03□□□□□ -0.16
HttP42859 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.03□□□□□ -0.16
HttP42859 Gm37028-201ENSMUST00000194276 107 ntBASIC14.03□□□□□ -0.16
HttP42859 Gm18974-201ENSMUST00000221478 1031 ntBASIC14.03□□□□□ -0.16
HttP42859 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
HttP42859 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.03□□□□□ -0.16
HttP42859 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HttP42859 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HttP42859 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HttP42859 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
HttP42859 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
HttP42859 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HttP42859 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HttP42859 AC159376.1-201ENSMUST00000218504 630 ntBASIC14.02□□□□□ -0.16
HttP42859 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.02□□□□□ -0.16
HttP42859 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HttP42859 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HttP42859 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HttP42859 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.02□□□□□ -0.16
HttP42859 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HttP42859 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HttP42859 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
HttP42859 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HttP42859 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.02□□□□□ -0.17
HttP42859 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HttP42859 Mir483-201ENSMUST00000093631 73 ntBASIC14.02□□□□□ -0.17
HttP42859 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.02□□□□□ -0.17
HttP42859 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HttP42859 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HttP42859 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HttP42859 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
HttP42859 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.01□□□□□ -0.17
HttP42859 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HttP42859 Mir7076-201ENSMUST00000183519 74 ntBASIC14.01□□□□□ -0.17
HttP42859 Gm29615-201ENSMUST00000185371 697 ntBASIC14.01□□□□□ -0.17
HttP42859 Gm28224-201ENSMUST00000186078 697 ntBASIC14.01□□□□□ -0.17
HttP42859 Gm29001-201ENSMUST00000186177 697 ntBASIC14.01□□□□□ -0.17
HttP42859 Gm28292-201ENSMUST00000186593 697 ntBASIC14.01□□□□□ -0.17
HttP42859 Gm28101-201ENSMUST00000187608 697 ntBASIC14.01□□□□□ -0.17
HttP42859 Gm29076-201ENSMUST00000187689 697 ntBASIC14.01□□□□□ -0.17
HttP42859 Gm28302-201ENSMUST00000187931 697 ntBASIC14.01□□□□□ -0.17
HttP42859 Gm28646-201ENSMUST00000188220 697 ntBASIC14.01□□□□□ -0.17
HttP42859 Gm28205-201ENSMUST00000189177 697 ntBASIC14.01□□□□□ -0.17
HttP42859 Gm29032-201ENSMUST00000189797 697 ntBASIC14.01□□□□□ -0.17
HttP42859 Gm28695-201ENSMUST00000190300 697 ntBASIC14.01□□□□□ -0.17
HttP42859 Gm37448-201ENSMUST00000192795 697 ntBASIC14.01□□□□□ -0.17
HttP42859 Mir7686-201ENSMUST00000200604 57 ntBASIC14.01□□□□□ -0.17
HttP42859 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HttP42859 Gm6867-201ENSMUST00000219165 425 ntBASIC14.01□□□□□ -0.17
HttP42859 Gzmn-202ENSMUST00000225535 989 ntBASIC14.01□□□□□ -0.17
HttP42859 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HttP42859 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HttP42859 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HttP42859 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HttP42859 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HttP42859 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.01□□□□□ -0.17
HttP42859 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HttP42859 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HttP42859 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HttP42859 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.01□□□□□ -0.17
HttP42859 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HttP42859 CT485607.1-201ENSMUST00000216100 85 ntBASIC14.01□□□□□ -0.17
HttP42859 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
HttP42859 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HttP42859 Gm13736-201ENSMUST00000119272 253 ntBASIC14.01□□□□□ -0.17
HttP42859 Gm7902-201ENSMUST00000198842 947 ntBASIC14.01□□□□□ -0.17
HttP42859 Gm4797-201ENSMUST00000219075 1283 ntBASIC14.01□□□□□ -0.17
HttP42859 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HttP42859 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HttP42859 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HttP42859 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HttP42859 Gm12620-201ENSMUST00000119791 1986 ntBASIC14□□□□□ -0.17
HttP42859 Gm12612-201ENSMUST00000140182 1986 ntBASIC14□□□□□ -0.17
HttP42859 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HttP42859 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HttP42859 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14□□□□□ -0.17
HttP42859 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
HttP42859 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HttP42859 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HttP42859 Gm5616-201ENSMUST00000165252 384 ntBASIC14□□□□□ -0.17
HttP42859 Gm8741-201ENSMUST00000174736 384 ntBASIC14□□□□□ -0.17
HttP42859 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HttP42859 Gm38092-201ENSMUST00000195600 653 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms