Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp9P41245 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp9P41245 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Mmp9P41245 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Mmp9P41245 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp9P41245 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp9P41245 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp9P41245 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Mmp9P41245 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Mmp9P41245 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Mmp9P41245 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Mmp9P41245 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Mmp9P41245 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.37□□□□□ -0.59
Mmp9P41245 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.37□□□□□ -0.59
Mmp9P41245 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.37□□□□□ -0.59
Mmp9P41245 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.37□□□□□ -0.59
Mmp9P41245 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.37□□□□□ -0.59
Mmp9P41245 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.37□□□□□ -0.59
Mmp9P41245 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Gm8396-201ENSMUST00000057361 823 ntBASIC11.37□□□□□ -0.59
Mmp9P41245 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Mmp9P41245 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.37□□□□□ -0.59
Mmp9P41245 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Mmp9P41245 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Matn2-203ENSMUST00000226766 3252 ntBASIC11.37□□□□□ -0.59
Mmp9P41245 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Mmp9P41245 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Mmp9P41245 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.37□□□□□ -0.59
Mmp9P41245 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Mmp9P41245 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp9P41245 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.36□□□□□ -0.59
Mmp9P41245 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp9P41245 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.36□□□□□ -0.59
Mmp9P41245 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp9P41245 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp9P41245 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp9P41245 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp9P41245 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp9P41245 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp9P41245 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp9P41245 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Mmp9P41245 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.36□□□□□ -0.59
Mmp9P41245 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp9P41245 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.36□□□□□ -0.59
Mmp9P41245 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Mmp9P41245 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Mmp9P41245 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp9P41245 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp9P41245 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp9P41245 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp9P41245 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.36□□□□□ -0.59
Mmp9P41245 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.36□□□□□ -0.59
Mmp9P41245 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp9P41245 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.36□□□□□ -0.59
Mmp9P41245 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.36□□□□□ -0.59
Mmp9P41245 Gm27300-201ENSMUST00000184085 97 ntBASIC11.36□□□□□ -0.59
Mmp9P41245 Gm27335-201ENSMUST00000184758 97 ntBASIC11.36□□□□□ -0.59
Mmp9P41245 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.36□□□□□ -0.59
Mmp9P41245 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.36□□□□□ -0.59
Mmp9P41245 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp9P41245 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.36□□□□□ -0.59
Mmp9P41245 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp9P41245 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp9P41245 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp9P41245 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp9P41245 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms