Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Kdm5cP41230 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Kdm5cP41230 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Kdm5cP41230 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Kdm5cP41230 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC19.25■□□□□ 0.67
Kdm5cP41230 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Kdm5cP41230 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Kdm5cP41230 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Kdm5cP41230 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC19.25■□□□□ 0.67
Kdm5cP41230 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Kdm5cP41230 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm5cP41230 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm5cP41230 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm5cP41230 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm5cP41230 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC19.24■□□□□ 0.67
Kdm5cP41230 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC19.24■□□□□ 0.67
Kdm5cP41230 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC19.24■□□□□ 0.67
Kdm5cP41230 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC19.24■□□□□ 0.67
Kdm5cP41230 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm5cP41230 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Kdm5cP41230 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm5cP41230 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm5cP41230 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm5cP41230 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Kdm5cP41230 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm5cP41230 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm5cP41230 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm5cP41230 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm5cP41230 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm5cP41230 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Kdm5cP41230 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Gm44126-201ENSMUST00000204831 514 ntBASIC19.23■□□□□ 0.67
Kdm5cP41230 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Kdm5cP41230 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC19.23■□□□□ 0.67
Kdm5cP41230 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Kdm5cP41230 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Kdm5cP41230 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Kdm5cP41230 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC19.23■□□□□ 0.67
Kdm5cP41230 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Kdm5cP41230 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm5cP41230 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Kdm5cP41230 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm5cP41230 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm5cP41230 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm5cP41230 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm5cP41230 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm5cP41230 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm5cP41230 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm5cP41230 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Kdm5cP41230 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm5cP41230 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Kdm5cP41230 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm5cP41230 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC19.22■□□□□ 0.67
Kdm5cP41230 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm5cP41230 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm5cP41230 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC19.22■□□□□ 0.67
Kdm5cP41230 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC19.22■□□□□ 0.67
Kdm5cP41230 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm5cP41230 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm5cP41230 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm5cP41230 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm5cP41230 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm5cP41230 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm5cP41230 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Kdm5cP41230 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm5cP41230 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm5cP41230 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm5cP41230 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm5cP41230 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm5cP41230 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm5cP41230 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
Kdm5cP41230 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Kdm5cP41230 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm5cP41230 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms